Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03466 ATGGTTTCTTGGGAAAAACCCCATGCTGTATTAATTCCATACCCAGCACAAGGTCACATAAACCCAACCCTAAAACTAGCAAAGCTTCTTCACCACAAAGGCTTCCACATCACTTTCGTTAACACTGAATACAATCACAACCGCCTTCTGAAATCGAGAGGCTCCGACTCACTGAAAAGTCTATCCTCCTTCCGATTCGAAACCATCCCCGATGGTCTACCTGTGGACCCTAATCATGGGGATGCAACGCAGGATATACCTTCTTTGTGTAAGTCCACAGCAACAAGTTGTTTGCCACACTTGAAGAACCTCATTTTGAAGCTGAATGATAATAATTGCGGCGACCAAGTTGTTCCTGGTGTTAGTTGCATAGTGTGCGATGCTGTGATGAGTTTTGGAGTTGATGCTGCTCAAGAATTGGGAATCCCTGTGGCCGTTTTCTGGACAGCAAGTGCTTCTTCGTTCACATGTTGCATACAATATTCTCAGCTTCTTCGTAAAGGCTTAGTACCCCTCAAAGACTCAAGTTATCTCACAAATGGGTATTTGGAAACTACAATAGATTGGGTCCCCGGAATAAAAGAGATTCGTTTGAGAGATATTCCCAGCTTCATCAGAACCACAGATCCAAATGATATTATGCTCAACTTTTTTCTAAGAGAAATGGAGAGATCTCAAAGAGCTTGTGCAATCATAATAAATACATTTGATACCTTAGAGCGTGATATTTTGGAGGCATTCTCCTCCATTAATAGTTTGCCACCTGTCTATTCCATTGGTCCTATGGATTTTCTCTTGAACCATATCACTGACCATGAATTGAATAAAATTGGATCCAACCTTTGGAAGGAGGATCAAGAATGCATTACATGGTTAGACAAACAAGAACCAAATTCAGTGGTGTACATAAACTTTGGTAGCATCACAACTATGACCAATGAAAATTTAATAGAATTTGCTTGGGGAATTGGCAATAGCAACAAGAGATTCTTGTGGGTAATTAGGCCAGATCTTGTGGCTGGTGAAAATGCTATTCTTCCTAATGAATTTCTTGAAGAGACTAAAGTTAGAGGCATATTATCAAATTGGTGTCCCCAAGAAGAGGTTTTGGCTCACCCTTCAGTTGGGGTGTTTTTGACACATAGTGGTTGGAACTCAACATTGGAAAGTGTGTGCAATGGTGTGACAATGATATGTTGGCCATTCTTTTCGGACCAAATGACCAATTGTAGATTCTCTTGTAATGAATGGGGAATTGGGTTGGAGATAGAAGATGTTAAGAGGGAGAAAATTGAAAGTCTTGTGAGGGAGTCAATGGATGGGGAAATGGGTCAACAGATGAAAGAAAAGGCTTTAGAGTTGAAGAAATTGGCAAAGGATGCTGCTTCTGACCCAAATGGATCCTCGTTTCAGAATTTAGACAAGGTGATTCATGATGCACTATTGAGCAAATTTGCTAAAAATTAG 1467 0.4049 MVSWEKPHAVLIPYPAQGHINPTLKLAKLLHHKGFHITFVNTEYNHNRLLKSRGSDSLKSLSSFRFETIPDGLPVDPNHGDATQDIPSLCKSTATSCLPHLKNLILKLNDNNCGDQVVPGVSCIVCDAVMSFGVDAAQELGIPVAVFWTASASSFTCCIQYSQLLRKGLVPLKDSSYLTNGYLETTIDWVPGIKEIRLRDIPSFIRTTDPNDIMLNFFLREMERSQRACAIIINTFDTLERDILEAFSSINSLPPVYSIGPMDFLLNHITDHELNKIGSNLWKEDQECITWLDKQEPNSVVYINFGSITTMTNENLIEFAWGIGNSNKRFLWVIRPDLVAGENAILPNEFLEETKVRGILSNWCPQEEVLAHPSVGVFLTHSGWNSTLESVCNGVTMICWPFFSDQMTNCRFSCNEWGIGLEIEDVKREKIESLVRESMDGEMGQQMKEKALELKKLAKDAASDPNGSSFQNLDKVIHDALLSKFAKN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03466 488 Gene3D Glycogen Phosphorylase B; 283 460 - -
Aip06g03466 488 PANTHER GLYCOSYLTRANSFERASE 52 481 - -
Aip06g03466 488 PANTHER GLYCOSYLTRANSFERASE 4 53 - -
Aip06g03466 488 CDD GT1_Gtf-like 7 466 IPR002213 GO:0008194
Aip06g03466 488 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 53 - -
Aip06g03466 488 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 52 481 - -
Aip06g03466 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 214 465 IPR002213 GO:0008194
Aip06g03466 488 Gene3D Glycogen Phosphorylase B; 8 464 - -
Aip06g03466 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03466 Aip-Chr6 131821193 131825045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03466 5 485 Glycosyltransferase AT1G22380 56.818 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03466 - - gmx:100784251 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03466 06 131821193 131825045 Aip06g03466 06 131821193 131825045 ECH