Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03456 ATGCAACGTTTGAAAACTCTGCTGCCTGAAAAATGTAGATTCTCTCTTCGCACACTATGCTCTCATCCTCGAGCTTTCTCTGCTCAAGTGCACCACCATATCGATGATGATCACGATGATCCCCAACGGCAGATTTTGGTTGAAGGAAGAGCGAAATCGAGAGCAGCTATACTCAACAGGCCATCTTCACTGAATGCGCTCACAACTTCAATGGTTGCTAGGCTTAAGAGGCTGTATGATTCGTGGGAAGAAAATTCTGACATTGGCTTTGTCTTAATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATAACTCACTGAATGAAGGAAATGTTGAAGAAGCTGAACAGTTTCTCAGAACATTATATTCATTCGCATATCTTCAAGGGACATATCTTAAGCCACATGTAGCTATTCTCGATGGAATAACAATGGGATGTGGAGCTGGAATTTCTCTTCCGGGGATGTATCGTGTGGTTACTGATAAAACTATTTTTTCACACCCAGAGGCTCAGATAGGTTTCCACCCTGATTCAGGAGCTTCTTATTATTTATCTCGTTTACCTGGATACCTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTAAATGGTGTAGAAATGATTGCTTGTCACCTTGCTACTCACTTTACACTAAATGCGAGGCTTCCTTGGCTTGAAGAACGCCTAGGAAAATTGATCACAGATGATCCTTCTATTGTGGAGACATCTCTTGCCCAGTATGGAGATATTGTTTACCCAGACAAAAGCAGTGTCCTTCACAAGATTGATACTATTGATCGATGTTTCTGTCATGATACAATGGAGGAAATTATTGAAGCTTTGGCCAAGGAAGCAGCTGAGTCTTATGATGAATGGTGTATATCAACTCTTAGGAAGATTAGAGAAGCATCTCCATTGAGTTTGAAAATTACTTTAGAATCTATACGTGAAGGTAGATTTGAAACACTAGATCAATGTCTGGCACGTGAGTACCGGATATCCCTTCGTGGAATTTCCAAGCAGTTCTCCTCTGATTTCTTTGAGGGTGTTAGAGCAAGAATGGTTGATAAAGATTTTACCCCCAAGTGGGATCCACCTAGTTTAAAGGATGTATCAGATGACATGGTTCAATCATATTTCTCTCCGTTCAACGAAGTAGAGTCTGAACTGGTATTACCGACGGCATTGCGAGAACCTTACATGTGA 1227 0.4165 MQRLKTLLPEKCRFSLRTLCSHPRAFSAQVHHHIDDDHDDPQRQILVEGRAKSRAAILNRPSSLNALTTSMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYNSLNEGNVEEAEQFLRTLYSFAYLQGTYLKPHVAILDGITMGCGAGISLPGMYRVVTDKTIFSHPEAQIGFHPDSGASYYLSRLPGYLGEYLALTGDKLNGVEMIACHLATHFTLNARLPWLEERLGKLITDDPSIVETSLAQYGDIVYPDKSSVLHKIDTIDRCFCHDTMEEIIEALAKEAAESYDEWCISTLRKIREASPLSLKITLESIREGRFETLDQCLAREYRISLRGISKQFSSDFFEGVRARMVDKDFTPKWDPPSLKDVSDDMVQSYFSPFNEVESELVLPTALREPYM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03456 408 CDD crotonase-like 58 222 - -
Aip06g03456 408 Pfam Enoyl-CoA hydratase/isomerase 55 387 IPR045004 -
Aip06g03456 408 Gene3D - 39 402 - -
Aip06g03456 408 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 35 408 IPR032259 GO:0003860
Aip06g03456 408 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 35 408 - -
Aip06g03456 408 SUPERFAMILY ClpP/crotonase 56 373 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03456 Aip-Chr6 131667037 131672318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03456 21 408 Acyl Lipid Metabolism Gene Families AT4G31810 70.332 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03456 K05605 - gmx:100808892 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03456 06 131667037 131672318 Aip06g03456 06 131667037 131672318 ECH