Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03445 ATGAGAAATAGCATTGTCATTGCGTTTCCTTTGAGATTGAGACCAAACATTAGCAATACTCTACTACATCACAAGTTCCGGCCAACCTGCTTTCACAGCCATGAAGGACATACCATTAGTTGTGTGCCCTACCCCGCTCCTCAAACAAAGCCCATGGCGCTTCATTTCGAGCCAATGCTTCTTACACCCGAAGAATCAATTCAGATACAAAATAGAATTGGAGCAGATATTATTATGGCTTTGGATGATGTCGTAAAGACCACCATTACTGGTCCAAGAATTGAGGAAGCTATGTATCGAACGCTTAGATGGATAGACAGATGCATAACAGCCCACAAGAGACCTCACGATCAGAACTTGTTTGGTATTGTACAAGGTGGTTTAGATCCTGAGTTGAGGGACATCTGTGTCAAAGGTTTGGTAGACCGCAACTTGCCTGGTGCTTTGGGTGCAGACATGTATGATTGTGTCTACCCCACCCGTACAGCACGTTTTGGGACTGCCCTTATTCCTGAGGGAGTACTAAAACTAAAACACAGAGCCATGGCTGATGATACTCGACCAATTGATCCTACCTGCCCTTGTATGGTTTGCAAGAACTACACCAGGGCCTACATCCATTGCCTTGTCACTAAAGACGCCATGGGGTCTCAGCTTCTATCATATCATAATTTATATTACATGATGCGGCTTAGCAGGAATTTACACACATCAATAGTTGAGGGAAGGTTCCCAAAGTTTGTATGTGACTTTTTACAAACAATGTTTCCCAAAGGTGATGTTCCTGAATGGGTCTGCAATGCTATGGAGGTGGCCGGAATCGACATTTCTTCCTGCTGTGCTACATTTCCATCATGCCAAGAAAAGTATTCCAGCGATGAAATCGGAACTAATCGATTTGATAAGGTCAAAATTGAAATTTAA 924 0.4318 MRNSIVIAFPLRLRPNISNTLLHHKFRPTCFHSHEGHTISCVPYPAPQTKPMALHFEPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCITAHKRPHDQNLFGIVQGGLDPELRDICVKGLVDRNLPGALGADMYDCVYPTRTARFGTALIPEGVLKLKHRAMADDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMRLSRNLHTSIVEGRFPKFVCDFLQTMFPKGDVPEWVCNAMEVAGIDISSCCATFPSCQEKYSSDEIGTNRFDKVKIEI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03445 307 Pfam Queuine tRNA-ribosyltransferase 59 147 IPR002616 GO:0006400|GO:0016763
Aip06g03445 307 Pfam Queuine tRNA-ribosyltransferase 148 255 IPR002616 GO:0006400|GO:0016763
Aip06g03445 307 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 58 147 IPR002616 GO:0006400|GO:0016763
Aip06g03445 307 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 149 254 IPR002616 GO:0006400|GO:0016763
Aip06g03445 307 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 49 147 - -
Aip06g03445 307 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 148 279 - -
Aip06g03445 307 Gene3D - 149 257 IPR036511 GO:0006400|GO:0016763
Aip06g03445 307 SUPERFAMILY tRNA-guanine transglycosylase 57 254 IPR036511 GO:0006400|GO:0016763
Aip06g03445 307 Gene3D - 48 148 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03445 Aip-Chr6 131405812 131409537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03445 K00777 - gmx:100819664 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03445 06 131405812 131409537 Aip06g03445 06 131405812 131409537 ECH