Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03419 ATGACTGTGCGACCGGCACCGCCTTCTGAGAGCCAGTTGTTGAGCTCTTTCTTGCTTGGGCTTCTGGTTGATTTTGGGAAAAATTCTGATGAAGATGATGATGACTATGATGATACTGGTGGTGGCGGTGTTAGCTTTTCTCTTCTTCAACCCCAATTCGCTTCGATGGCATCTGCAGTGCTATCCATAGCTACACAGTGTGTTTCTCCCAATGCTTCTTCACTGTCGATTAACGAAACCCACAAGTCTTCTGGACGGATCTCTATGACTGTTGCAGTTAATGTTTCTCGATTTGAGGGCATTCCGATGGCTCCTCCTGATCCAATTCTTGGAGTATCAGAAGCATTTAGAGCAGACACAAATGATGTCAAGCTCAACCTTGGAGTTGGGGCCTACAGGACAGAGGAACTACAGCCATATGTGCTTAATGTTGTGAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGGGACAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCATTTAATAAGGCAACAGCAGAGTTGTTACTCGGAGCAGACAACCCTGCAATCAAAGAACAAAGAGTTGCTACTGTCCAAGGTCTTTCTGGAACCGGTTCTCTCAGACTAGGAGCAGCTCTGATAGAACGATATTTTCCCGGGTCAAAAGTTTTGATATCGGCTCCCACCTGGGGTAATCACAAGAATATTTTTAATGATGCTAGGGTCCCATGGTCTGAGTACCGTTATTATGATCCCCGGACAGTTGGTTTGGATTTTGAGGGCATGATAGAAGATATTAAGGCAGCCCCTGAAGGAACTTTTGTGCTACTTCATGGATGTGCTCATAACCCAACTGGTATTGACCCAACACCTGAACAGTGGGAAAAAATAGCAGATGTAATTCAACAGAAGAACCACATTCCATTTTTCGATGTTGCTTACCAGGGATTCGCTAGTGGAAGCCTCGATGAAGATGCAGCATCTGTGAGATTGTTTGTGGCACGTGGCATGGAGGTTCTTGTTGCCCAATCTTACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATGAATGTCATTTCATCATCTTCTGAATCTGCAACAAGGGTAAAGAGCCAATTGAAGAGGCTAGCACGACCAATGTACTCTAATCCACCAGTTCACGGGGCCAGGATTGTCGCCAACGTTGTTGGAACTCCTGTCCTTTTTGATGAATGGAAAGCGGAGATGGAGATGATGGCTGGAAGGATAAAGAATGTCAGGCAGAAGCTATATGATAGTATTTCTTCAAAAGATAAGAGTGGGAAAGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCGTACACAGGCTTGAACAAGAACCAGAGTGACAATATGACCAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCACTAGCAGGATTGTCATTGGCCAAATGTGAATACTTGGCTGATGCTATCATTGATTCATACCATAATGTCAGCTGA 1497 0.4415 MTVRPAPPSESQLLSSFLLGLLVDFGKNSDEDDDDYDDTGGGGVSFSLLQPQFASMASAVLSIATQCVSPNASSLSINETHKSSGRISMTVAVNVSRFEGIPMAPPDPILGVSEAFRADTNDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKEQRVATVQGLSGTGSLRLGAALIERYFPGSKVLISAPTWGNHKNIFNDARVPWSEYRYYDPRTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQQKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAMNVISSSSESATRVKSQLKRLARPMYSNPPVHGARIVANVVGTPVLFDEWKAEMEMMAGRIKNVRQKLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03419 498 CDD AAT_like 125 490 - -
Aip06g03419 498 Gene3D Aspartate Aminotransferase, domain 1 101 490 IPR015422 GO:0003824
Aip06g03419 498 PANTHER ASPARTATE AMINOTRANSFERASE 71 496 IPR000796 GO:0006520|GO:0008483
Aip06g03419 498 Pfam Aminotransferase class I and II 124 490 IPR004839 GO:0009058|GO:0030170
Aip06g03419 498 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 340 353 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aip06g03419 498 Gene3D - 156 397 IPR015421 GO:0003824
Aip06g03419 498 PRINTS Aspartate aminotransferase signature 370 395 IPR000796 GO:0006520|GO:0008483
Aip06g03419 498 PRINTS Aspartate aminotransferase signature 439 457 IPR000796 GO:0006520|GO:0008483
Aip06g03419 498 PRINTS Aspartate aminotransferase signature 271 290 IPR000796 GO:0006520|GO:0008483
Aip06g03419 498 PRINTS Aspartate aminotransferase signature 302 314 IPR000796 GO:0006520|GO:0008483
Aip06g03419 498 SUPERFAMILY PLP-dependent transferases 96 492 IPR015424 -
Aip06g03419 498 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 71 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03419 Aip-Chr6 131108958 131118440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03419 K00811 - gmx:547792 795.808