Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03415 ATGGAACCGGAAGTGAGCATCGAGGGCTCCGCCATGATCCAGGTGGCGGTTCTCCCCATCGGTCCGGTCCCCCCTAACTCCCTGCGCGACTATTATTCCATGCTCCTGCCACTCCACACGATCCCTCTCTCCGCAATCAGATCCTTCTACACCGAGCACCAGAAATCCCCCTTCGCTAACCAGCCATGGGACTCCGGTTTCATTCGCTTCAAATTCGTTCTCGGCGGCAACTCTCCGTCTCCGTGGGAGGACTTTCAGTCGCACCGCAAGACCCTCGCCGTCGTCGGACTCTGCCATTGCCCTTCCTCCCCTGATCTCGACTTAGTCATTGATCAATTCAACGCTTCCTGTAGGTCCTACTCTTCTTCGCTTGTGCATCGTTGCTTCGCCTTCTGCCCCAACGATTCCCAGCTTGAGGAAGGAGGAAGGCAAGGGGGGAATTTGAGGTTGTTTCCACCTGCGGATCGTCCAACATTGGAGTTTCACCTCCACACTATGATGCAGGAAATAGCTGCATCACTGCTTATGGAATTTGAGAAATGGGTGCTACAGGCGGAGTCTTCTGGAACCATTCTCAAGACACCACTGGATTCTCAAGCCGGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGCGGAGACTTGGACGTGCACAGAAGACAATCGGTGACTACTGCTTGCTGGCTGGATCCCCAGTTGATGCTAATGCTCATTATTCTACGGCATTGGAACTTTGTAGGTTGACTGGGGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTGGTTGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATACTCAACGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGAGAGAGTTGGCCAAGGAGGTGGTTGAGTTGTTGACCACTGCTGCCGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTTGTATTATATATTGAAATTGCTCGTTTGTATGGTAATCTTGGGTACCAGAGAAAAGCTGCTTTCTTTTCTAGGCAGGTTGCTCAGTTATATCTTCAGCAAGAAAATCGATTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACAACAAAAGCGTATCATGTTCAAAGTAGATCCTCAATATCAGATCATTCTCAGAAAAATAAGGGAAATGGAGATGGCGGGAAAACTTATCACCAATCAGCAGTTTCATTATTCGAATCTCAATGGAGTACCCTCCAGATGGTTGTGCTGAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGATCCTCTTACTGCATGGAGTGCTGCAGCCCGACTTCTCAGACACTACTATCCTCTAATAACTCCTGGTGGTCAAAATGGCCTTGCAAATGCCCTTTCAAATTCAGCAGATAGGCTGCCACCAGGGACACGATGTGCTGATCCTGCTTTACCTTTTATAAGGTTGCATTCTTTTCCGCTCCTCCCGATACAAATGGACATTGTAAAACGGAATCCAGCCAGACCAGACTGGTGGGCAGGTTCTGCTCCTTCAGGTCCATTCATTTATACACCCTTCAGTAAAGGAGATCCAATCAATGTCAAGAAGCAAGAACTTATCTGGGTTGTTGGAGAGCCTATCCAGGTCATGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGACAGCATATACCTATCTGTTCATTCAGGAAACTTAGATGCTTTTCCCATGAGTGTAAAACTCTTGCCAAATTCATCGAAAGTGATCACCTTATCAGGCATTCCAACATCAGTGGGGCCGGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAGCATCTTTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCACCCAAGGGCTTGTCCTTTCTGACCCTTTCCGATCTTGTGGATCTCCAAAGTTGAAGAATGTAACAGTTCCAAATATTTCTGTAGTTCCACCACTTCCGTTGCTGATATCACGTGTTGTTGGAGGTGATGGTGCCATCATTTTATATGAAGGTGAAATTCGTGATATATGGATAAGTCTGGCTAATGCAGGCACAGTTGCAATTGAGCAGGCGCATATTTCACTGTCAGGGAAAAATCAAGATTCTGTGATTTCATATTCTAGTGAGACTTTAAAATCTTGCCTCCCTCTAAAGCCTGGTGCTGAAGTGACAATTCGTGTGACCTTGCGAGCCTGGCAGGTTGGATCAGTGGATGTTGATGCTGGTGGTGGGAAGGCTGTCTCTGGAAGCAATGTGAGGCACATCAAAGATGGAAGCAGTCCATCACTTATGATCCACTATGCTGGACCACTTCAAACCACTGGAGATACTCCAGCAAATGCATCTACTGTGCCCCCTGGCAGACGCCTTGTTGTTCCCTTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTCGTAAAGGCTCAGCTTCTTTCAATGGAATTTCCTGCCCATGTCGGTGAAAATCTTCCCAAGGTTGATGATCTAGATTCCACAGGACATTTTGACTCTACAACAAACATGGACAAATTGGTGAAGATAAATCCTTCCAGAGGAAGTTGGGGACTGAGATTTCTCGAACTCGAGTTATCTAATCCAACTGACATTGTGTTTGAAATCAATGTCTCCATCAAACTAGACAAATCTAGCAACGAGGGAAATCATTCTGTTGATCAGGATGCTGCTGAACACAGCTATCCTAAGACAAGAATCGATAGGGATTGCTCGGCAAGGGTTCTAGTGCCACTCAAGCATTTCAAATTACCTGTTCTTGATGATTCCTTTTTCATGAGGGACAATCAGGCAGATGGCAGAAGCACACCCTTCTCTCAAAAGAACACAAAAGCCGAGCTCAATGCTTGTATCAAGAGCCTTATCTCCAGGATCAAGGTCCGGTGGCATTCGGGACGTAATAGCTCTGGCGAGTTGAATATCAAGGACGCGATCCAGGCAGCATTGCAGACATCAATCATGGATGTCCTGCTGCCAGATCCACTGACTTTCATGTTCAGGCTCACTGGACATGATGTTGAATCAGAAAAACCTGATCCTGATAAAGAATCTAATATCGTCGAATCTTCTGCTTCCAGAGGTTCAGTGATTGCACATGAAATGACGCCAATGGAGGTTCTGGTTCGTAATAACACAAAGGATATGATCAAAATCAATTTCAATATTACATGCAGAGATGTAGCTGGGGAGAATTGTGTCGATGGAACCAAAGCAACTGTTTTATGGACAGGTGTTCTAAGTGACATCAGTGTGGAAATTCCCCCACTTCAACAAATCAAACATTCTTTCTGCTTGCATTTTCTTGTCCCGGGAGAGTACACACTATTAGCCGCAGCAGTGATTGATAATCCAAGCGACATTCTACGTGCTCGTGCAAAGGCCACCTCACCATCCGAGCCAATTTTCTGCCGGGGACCACCGTATCACGTTCGTGTTCACGGAACTGCTTGA 3570 0.4591 MEPEVSIEGSAMIQVAVLPIGPVPPNSLRDYYSMLLPLHTIPLSAIRSFYTEHQKSPFANQPWDSGFIRFKFVLGGNSPSPWEDFQSHRKTLAVVGLCHCPSSPDLDLVIDQFNASCRSYSSSLVHRCFAFCPNDSQLEEGGRQGGNLRLFPPADRPTLEFHLHTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQAGLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELCRLTGDYFWYAGALEGSVCALLIDRMGQKDSVVEEEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLVLYIEIARLYGNLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSQKNKGNGDGGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRHYYPLITPGGQNGLANALSNSADRLPPGTRCADPALPFIRLHSFPLLPIQMDIVKRNPARPDWWAGSAPSGPFIYTPFSKGDPINVKKQELIWVVGEPIQVMVELANPCGFDLRVDSIYLSVHSGNLDAFPMSVKLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFKEVDNLLLGATQGLVLSDPFRSCGSPKLKNVTVPNISVVPPLPLLISRVVGGDGAIILYEGEIRDIWISLANAGTVAIEQAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTIRVTLRAWQVGSVDVDAGGGKAVSGSNVRHIKDGSSPSLMIHYAGPLQTTGDTPANASTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGENLPKVDDLDSTGHFDSTTNMDKLVKINPSRGSWGLRFLELELSNPTDIVFEINVSIKLDKSSNEGNHSVDQDAAEHSYPKTRIDRDCSARVLVPLKHFKLPVLDDSFFMRDNQADGRSTPFSQKNTKAELNACIKSLISRIKVRWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFMFRLTGHDVESEKPDPDKESNIVESSASRGSVIAHEMTPMEVLVRNNTKDMIKINFNITCRDVAGENCVDGTKATVLWTGVLSDISVEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDNPSDILRARAKATSPSEPIFCRGPPYHVRVHGTA 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03415 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 188 IPR013935 -
Aip06g03415 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 738 IPR013935 -
Aip06g03415 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 274 IPR013935 -
Aip06g03415 1189 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1188 IPR013935 -
Aip06g03415 1189 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03415 Aip-Chr6 131027472 131035067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03415 K20306 - gmx:100784850 2068.51