Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03315 ATGTTCAAAGAGTTCAAAGAACTTGAATCTGGAAAGAAGATCAAGTGTTTAAGGACGGATAATGGAGGAGAATATGTCGATGGTAATTTTCTAACATTTTGCAAGCAAGCAGGTATTCAACAACAATTCACAGTTGCATACACGCCTCAGCAAAATGGTGTATCAGAGCGAATGAATAGGACTCTCCTAGAAAGAGCACGAGTTATGTTACAAACTGCAGGTTTAGCTAAGTCTTTTTGGGCAGAAGCTGTTAAAATCGCCTGTTATGTGATAAATCGGTCACCATCAACTGCAATTGGGTTGAAGACACCAACGGAGATGTGGCAAGAAACTCCAAGAAGAAGAAGAGCAGCAATGGCGTCTTCGTTCATTCAATCCTTCATTGATCCAAAGAAGAACTGGTTCGCCGCTCAGCACATGAAAGCCATCTCCAAGCGCCTCCGCAGATTCGGTCTGCGGTACGACGATCTGTACGATCCGTATTACGATCTGGATGTGAAGGAGGCACTGAATCGGCTTCCGAAGGAGGTAGTCGACGCGCGCCACCAGCGCCTTAAGCGCGCTATGGACCTTTCCATGAAGCACGAGTACCTCCCTGAAGATCTTCAGGCAATGCAAACACCATTCAGGGGATACCTTCAGGAGATGCTTGCCCTTGTGAAGAGGGAGAAAGCGGAGCGTGAATCCTTGGGAGGCTTGCCCCTATATCAACGCACCATTCCTTAA 726 0.4683 MFKEFKELESGKKIKCLRTDNGGEYVDGNFLTFCKQAGIQQQFTVAYTPQQNGVSERMNRTLLERARVMLQTAGLAKSFWAEAVKIACYVINRSPSTAIGLKTPTEMWQETPRRRRAAMASSFIQSFIDPKKNWFAAQHMKAISKRLRRFGLRYDDLYDPYYDLDVKEALNRLPKEVVDARHQRLKRAMDLSMKHEYLPEDLQAMQTPFRGYLQEMLALVKREKAERESLGGLPLYQRTIP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03315 241 Pfam Ubiquinol-cytochrome C reductase complex 14kD subunit 124 228 IPR003197 GO:0005750|GO:0006122
Aip06g03315 241 PANTHER UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN 121 241 IPR003197 GO:0005750|GO:0006122
Aip06g03315 241 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 7 121 241 - -
Aip06g03315 241 ProSiteProfiles Integrase catalytic domain profile. 1 112 IPR001584 GO:0015074
Aip06g03315 241 Gene3D - 117 231 IPR036544 GO:0005750|GO:0006122
Aip06g03315 241 SUPERFAMILY Ribonuclease H-like 7 110 IPR012337 -
Aip06g03315 241 SUPERFAMILY 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 117 236 IPR036544 GO:0005750|GO:0006122
Aip06g03315 241 Gene3D - 1 116 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03315 Aip-Chr6 129670600 129676277 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03315 K00417 - gmx:100499867 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03315 06 129670600 129676277 Aip06g03315 06 129670600 129676277 ECH