LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g03306	ATGAGAACTTCATCATCTTCTTGTTCTCTAGAGTGTGTTGAAGGGCCAATCATAGTAGGAGCAGGACCCTCCGGCATAGCCGTAGCCGCCTGTCTATCTCAGTACTCCATTCCTTCAATAATCTTAGAGCGAAGCCACTGCATCGCTTCGCTCTGGCAAAACAAAACCTACGACCGCCTCAAACTCCATCTCCCTAAAAATTTCTGCCAACTCCCTCTAATGGGGTTCCCACAAACCTTCCCAAAGTACCCAACCAAGTACCAGTTCATCTCCTACATGGACTCCTACGCTTCCCATTTCAAGGTTCAACCCAGGTTCAACCAGACAGTCCACGTGGCCGAGTTTGATCCCTCTTCCCAGATTTGGCTCGTTAGGACCCAAGATTCTCTCTACCTTTCCCCTTGGCTCATTGTAGCTACCGGAGAAAATGCCGAACCTATGATTCCCAAGATTCTCGGCATCGACAAGTTTCATGGTGCTGTTGTTCATACTAGCGCCTATAAATCTGGTGATGCTTATAAGAACAAGAAGGTTTTGGTTATTGGTTGTGGAAATTCTGGCATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTAAGCCTTACATGGTTGCAAGAAATACGGTACATGTTCTCCCTAGGGAGATTTTGGGAATATCATCATTTGGAATAGCAATGGCACTATACAAATGGTTTCCACTAAAAATAGTAGACAAGTTTCTGTTGTTGGTGGCAAACATGATGTTGGGAAACACAAGTCATTATGGCATAAGAAGGCCCAAAACAGGTCCAATTGAACTTAAACTTGCCACAGGAAAAACCCCTGTTCTTGATGTTGGTCAAGTAGCACAAATCAAATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTGTGGATGGACAAGAAAAGGAATTCGATGCTATAATATTGGCAACGGGATACAAGAGCAACGTGCCTACTTGGCTCAAGATGACAATAGTATTCTTCCCTGCAATAGTGGCTTCCAAGCTTCGCATATCCACACAGTGCAACGTCGAGGGTGCACAACACCTTCTGGAAGGTTTCACCTGCACCCTCACCTACTTGCCCTCAGAACCTTCTGCCATCAACCTTTGTTTTTTGCGTCGCCGCAAGATAGGCCTAGCGAGTCCCTGA	1182	0.4535	MRTSSSSCSLECVEGPIIVGAGPSGIAVAACLSQYSIPSIILERSHCIASLWQNKTYDRLKLHLPKNFCQLPLMGFPQTFPKYPTKYQFISYMDSYASHFKVQPRFNQTVHVAEFDPSSQIWLVRTQDSLYLSPWLIVATGENAEPMIPKILGIDKFHGAVVHTSAYKSGDAYKNKKVLVIGCGNSGMEVSLDLCRHNAKPYMVARNTVHVLPREILGISSFGIAMALYKWFPLKIVDKFLLLVANMMLGNTSHYGIRRPKTGPIELKLATGKTPVLDVGQVAQIKSGNIKVMEGVKEITRNGAKFVDGQEKEFDAIILATGYKSNVPTWLKMTIVFFPAIVASKLRISTQCNVEGAQHLLEGFTCTLTYLPSEPSAINLCFLRRRKIGLASP	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g03306	393	Gene3D	-	15	340	IPR036188	-
	Aip06g03306	393	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED	12	336	-	-
	Aip06g03306	393	Pfam	Pyridine nucleotide-disulphide oxidoreductase	17	208	-	-
	Aip06g03306	393	SUPERFAMILY	FAD/NAD(P)-binding domain	17	209	IPR036188	-
	Aip06g03306	393	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	134	142	-	-
	Aip06g03306	393	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	173	197	-	-
	Aip06g03306	393	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	15	37	-	-
	Aip06g03306	393	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	31	-	-
	Aip06g03306	393	SUPERFAMILY	FAD/NAD(P)-binding domain	173	332	IPR036188	-
	Aip06g03306	393	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	12	336	-	-
	Aip06g03306	393	PRINTS	FAD-dependent pyridine nucleotide reductase signature	16	35	-	-
	Aip06g03306	393	PRINTS	FAD-dependent pyridine nucleotide reductase signature	177	195	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g03306	Aip-Chr6	129517526	129522084	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g03306	K11816		-	gmx:100818280	546.584