Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03299 ATGGCTTCCATGAATATATTCACTCCCATTTCACTCCCCTCCAACAGCTACTTCTCCCGCCGGCGACAACCCATCTCAGCCCCTTTTGCTGCCGTGAACCCGCCGGAATCTCCTCCCGCAAAGCCTGAAATAGAGCTTGAATTCATTGGGCCGAAGGCTTCAAGTGATGGATCGTACCCTGTGGATAAAGCAAAAGAAATAAGTGGAGAGAAGCTGTTGAGGAACATAATGTTGGATAATAAGATTGAGCTTTATGCCACCTATGGCAAGGTGATGAATTGCGGAGGAGGTGGCAGCTGTGGAACTTGCATAGTAGAGATACTTGAAGGAAAGGATCTTTTAAATGAGAGAACAAATACTGAGCTTCGATATCTTAAGAAGAAACCTGAATCTTGGAGGCTAGCTTGTCAAACTATTGTTGGAAACAAGGAAAACTCTGGGAAGGTTGTTGTTCAAAGGATTCCTCAGTGGAAGAAATAA 480 0.4458 MASMNIFTPISLPSNSYFSRRRQPISAPFAAVNPPESPPAKPEIELEFIGPKASSDGSYPVDKAKEISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEILEGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03299 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 88 140 IPR001041 GO:0051536
Aip06g03299 159 SUPERFAMILY 2Fe-2S ferredoxin-like 60 142 IPR036010 GO:0051536
Aip06g03299 159 Gene3D - 55 159 IPR012675 -
Aip06g03299 159 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 32 158 - -
Aip06g03299 159 PANTHER FERREDOXIN/ADRENODOXIN 32 158 IPR001055 GO:0051537|GO:0140647
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03299 Aip-Chr6 129380680 129389405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03299 - - gmx:100807125 260.381