Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03289 ATGGGGTGTGGAAAACTGAAGAGGTTTCTTGTTATGGTGTTGTTCATTGAACTTTTGGTGTGCTCAGTGGTGAGTGGAATTGGTGTTAACTGGGGAACACAAGCAACACACCCTTTGCCACCATCAACAGTGGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTGAAGCTTTTTGATGCTGACTCAAATATCTTAGAGGCTCTTAAGAAGACTCAGATCCAAGTCATGGTTGGTATCCCAAATGACATGCTTTACACACTTGCTAACAGTGTTCAAGCTGCTGAAAAATGGGTCTCAAAGAATATCTCAGCTCATATCTCATCTGGTGGAGTAGACATCAGGTATGTCGCCGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGAACGTTCGAGTCCACAACCCTTCCGGCTCTTCAAAACATCCAGTCAGCTCTTGTGAAGGCTGGTTTGGGCAACAGGGTTAAAGTCACCACCCCTTTAAATGCTGATGTGTATCAAAGTTCGTCGGATAAACCTTCTGACGGTGACTTCAGGACAGACATCCATGATCTCATGATAAAAATTGTCAGTTTCTTGAGCCAGAACAATGCTCCATTCACTGTAAACATCTACCCTTTCATCAGCCTTTACGCCGATCCCAACTTCCCAATGGACTATGCCTTCTTCAATGGCTTCTCAAGTGCTATAAACGACAATGGAAAGATCTATGACAATGTCTTTGATGCTAACCATGATACTCTAGTATGGGCATTGCAGAAGAATGGCTTCGGAAACCTGCCCATTATTGTCGGAGAGATCGGGTGGCCTACAGATGGGGACCGGAATGCAAACCTTCAATATGCCCAACGCTTCAACCAAGGCTTCACGTCTAGATACCTTGGCGGAAAAGGTACTCCAATGAGGCCAGGTCCGATCGACGCCTACCTATTTAGCCTCATAGATGAAGATAGCAAAAGCATTCAGCCAGGTAACTTCGAACGCCACTGGGGATTGTTTTACTACGACGGAAAGCCAAAGTACCAACTCAGCCTTGGACCGACAAGTCCGAACGGCTTGGTAGCTGCTAGTGGCGTCGCATATCTTCCTAAAAAGTGGTGTATTATGAAGCCGTCGGCGAACCTCAACAGCGACCAAGTTGCGCCGAGTGTATCTTATGCGTGCCAAAATGCTGATTGCACTAGTCTTGGATATGGAACTTCATGTGGAAATTTGGATGTTCAAGGTAACATATCTTATGCATTTAATAGCTATTTTCAGGTGAATGATCAAATGGACAGTGCATGCAAATTCCCTGGACTTTCTGTTGTCACCGAGAGAGATCCTTCAGTGGGTGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGTCAGAATTGGTTCTGTTAGAATATTGCTATTTGTATTCTTGTTTTTAGGTATTGTTCTGTAA 1440 0.4389 MGCGKLKRFLVMVLFIELLVCSVVSGIGVNWGTQATHPLPPSTVVKMLKDNGIQKVKLFDADSNILEALKKTQIQVMVGIPNDMLYTLANSVQAAEKWVSKNISAHISSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALVKAGLGNRVKVTTPLNADVYQSSSDKPSDGDFRTDIHDLMIKIVSFLSQNNAPFTVNIYPFISLYADPNFPMDYAFFNGFSSAINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFTSRYLGGKGTPMRPGPIDAYLFSLIDEDSKSIQPGNFERHWGLFYYDGKPKYQLSLGPTSPNGLVAASGVAYLPKKWCIMKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCGNLDVQGNISYAFNSYFQVNDQMDSACKFPGLSVVTERDPSVGDCKFKIMIQTDSAVRIGSVRILLFVFLFLGIVL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03289 479 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Aip06g03289 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 15 458 - -
Aip06g03289 479 Pfam X8 domain 366 435 IPR012946 -
Aip06g03289 479 Gene3D Glycosidases 26 349 - -
Aip06g03289 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 458 IPR044965 GO:0004553|GO:0005975
Aip06g03289 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Aip06g03289 479 SMART X8_cls 366 450 IPR012946 -
Aip06g03289 479 Gene3D - 363 459 - -
Aip06g03289 479 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03289 Aip-Chr6 129199386 129202828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03289 9 479 Glycoside Hydrolase AT4G31140 69.247 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03289 K19893 - gmx:100775918 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03289 06 129199386 129202828 Aip06g03289 06 129199386 129202828 ECH
Aip06g03289 06 129199386 129202828 Aip10g02251 10 100962152 100964122 PCT
Aip08g02954 08 117993842 117997197 Aip06g03289 06 129199386 129202828 PCT