Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03281 ATGTGCTCTCGTCCTCTCTCTCTTGCTTCTCCTTTCATCCGTCGCGCCTTTGATGTTTGCTTCCTCCCGCACATCGTGCCACTATCGTGTCTTCGATTCGCTCACATGAATCGGCTTCGTCTCCGTCTCCGCGCATGTCCTCCCTTGCAGTCGTTTTGTGTCGCTAGTCGTCCTCTTCATTGTGACGTCGTGGCTCGTCTTTTTCCTCTCTCTCTGGTTATATATTCTACTATGAGTAGACCAAATACGCGAAGCAAAAACAAGAGGCAGAGGCAAGGGGATGATGTTGATAACACTACCGAAATATGGAGGAAAATTCACAAAACGGGTGGTATAACTGAAGAAGATATAAACCAATTGTATATGATTTGGAAGCCGGTTTGTTCAGGTTGCCGTGTCAATGCTAAAGACAACCCAAATTGCTTCTGTGCATTGGTTCCTCCCCCAAATGGATCGCGGAAGTCTGGCTTGTGGATGAAGACGTCAGATTTTGTTGAAAGTCTTGGCCCCGACCCAACTAAGGATCTTCGTGCATCTGCTTCTTCACCTGCGGGTCTAACAAATCTTGGTGCAACCTGCTATGCCAACAGTATACTTCAGTGCTTCTGGTTCGGCTTTTTGTACCGTTGCCTGAGCCATTCCAAAATTGCAAAGGCAAGAACAATAGTTCAAGATCTTTTTCGTGGAAATGTGTCTCACGTGACAAAGTGCTCACAATGTGGAAAAGACTCTGAAGCTTCTTCGAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGATTACAAAGTTTATATGAGAGCCTAGATGATTACCTTGCTATTGAAGAGCTTCATGGAGACAACCAATATTATTGCGACTCATGTAGAGCAAGAGTTGATGCAACTCGTAGCATCAAGCTCCGCACATTGCCCGAAGTACTTAATTTTCAACTTAAACGATATGTTTTTCTTCCAAAGGGAAGTGCTGTTAATAGTGGTCACTACATTGCTCATATTAAGGATGAAAATACTGGGCAATGGTGGGAATTTGATGATGAGAATGTCACTAACTTAGGTCGTCATCCCTTTGGTGAAGAAGCTTCAAATTCTACTTCTAAATTGGCCAAGACTGATGTAGTTCATAGTAATTGCTCTGAAGCAAAGATAGCTGACAGTAATGGGAATGGTTTAGATGCCACGCTGTCTCACTCTTCCCATGTGGAGACATTTTCTTCTAGCGATGCATACATGTTGATGTACCATCTTAAACGTTCGAAAGATGTTGATGGAAAAGGTGTTATGTTTTCTGGTACTAACCATAAAGGAGAGCGTGATGCAGTTACTGCCCAGGATGATGCTTGTCTTCCTTTCCATCTTCGTGAAGAGATTAAAAATATCAATGCCTCATATCTTGATGCTTGTGAGCAGTACAAGCAAAAGAAAGAGTTAGAATTGAGTCGTATCAATGAGCGGAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCCCCTGTTCAGCCACTGAAGCAACCATTTTTTTGGATTTATAGTGACTGGCTTCGCCAGTGGGCTGACAACATCATTCCAACTGCTGTTGACAACACATCTATTCAATGTTCACATGGGAAAGTCCCAGTATCAAAGATTACCACAATGAAAAGATTGTCTTCTCAAGCATGGGATAAGCTACTCTCTAAGCATGGTGGGGGGCCCACACTTTCTCATGATGATTGCTGTTGGGATTGTCTGATTGAAGGAGCTCGGAATGTGGTGTCAGCTGATACCTATCGGGATCGAAGGGAATCACTGAAGCAGCTTGCACGGGATGTTCTAGATGGAAATTGTGAAGATGGAAAGTACTACATTTCCAGGCCATGGTTACAGCAATGGTGGAAACGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGCAGGACCAACAGCAGCTATTAGCTGTCCACATGGGCAGCTTATGCCTGAACAAGCTGCTGGTGCTAAGAGAGTGCTTGTTCCTGAGGATTTTTGGCTCTTCTTATATGAAGATTCTATCTCTGTAAAACCTGATGATCCTTTGGGTTGCCCTACTTTCCCTTTTGACTCCAGAGAGTGTTCTGAATGCAGTAATGAATTATCTGAAGTGGCTTGCTTTGAGGATTCATTGAGGTCATTAGTGAAGCAAAGACAACGTCAGAAACATGAGAAACTATTCCTGGGTAAAAGTATGCCGCTCTCTCTGCATTGCAAGTATTTCTTAGTTCCATCTTTGTGGATTTCAAAATGGAGAAATTATGTTAATCCATCCGTAAAGAATTCAGATAAACCTGAAACATTAGATGGGGTAATTGATTCACTGAAGTGTGAAAAGCACTCACGACTAGTTGAGAGGCCTCCTGAGTTGGTTTTCAGACGCAGTGCTATAGTGCCAAGAGAGTCTTCTGCAAGTGGTGTAACAGTTATATCTGAAAATGATTGGAAACTTTTATGTGAAGAATGGGGTGGTAATGAGGCCAAAGGAATATCTGCCAAAATTGAAAATATTGACGAGTCAGAGAATGTTTTGATTGGATCCTGTGAAGAGTTGCCAGTATGTGAGGATCAGTTGGGTTCTTCAGATAAAGTGAATAATGAAACTGAGAATGGACAATTCGTGATCAAGACTTGTCCAGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAGTTGATGCAGAAGCTAAACTATTGCAATGAGAACATAACTGTAATACTTGTCCGTGGAAAAGAGGTACCTAGATCAATATTGGAGGCTTCGAAGGGTTTTGTTGAAACAGAACGGCGGGCTTCTAAACGCACCCGTAAAACTAAAAATGGGAGTTCTATTAGTCTGAAAGTTTCTGCTTCGACATCAATTTACCAGCTTAAAATGATGATATGGGAATCATTTGGGGTGGTCAAGGAAAATCAGTTACTACAAAAGGGCGATAAGACAATTGACATTGATGATGAATACACTACACTTGCAGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCCGAGGAACTTTATGATGAGAAAATGGATACACAGCATACCGAGGAAGGGTTCCGGGGAACACTTTTGACCTCCAATGCTTCATCCCAGGCTGTTTAG 3156 0.4224 MCSRPLSLASPFIRRAFDVCFLPHIVPLSCLRFAHMNRLRLRLRACPPLQSFCVASRPLHCDVVARLFPLSLVIYSTMSRPNTRSKNKRQRQGDDVDNTTEIWRKIHKTGGITEEDINQLYMIWKPVCSGCRVNAKDNPNCFCALVPPPNGSRKSGLWMKTSDFVESLGPDPTKDLRASASSPAGLTNLGATCYANSILQCFWFGFLYRCLSHSKIAKARTIVQDLFRGNVSHVTKCSQCGKDSEASSKMEDFYELELNVKGLQSLYESLDDYLAIEELHGDNQYYCDSCRARVDATRSIKLRTLPEVLNFQLKRYVFLPKGSAVNSGHYIAHIKDENTGQWWEFDDENVTNLGRHPFGEEASNSTSKLAKTDVVHSNCSEAKIADSNGNGLDATLSHSSHVETFSSSDAYMLMYHLKRSKDVDGKGVMFSGTNHKGERDAVTAQDDACLPFHLREEIKNINASYLDACEQYKQKKELELSRINERRQEVRSVLAEAPVQPLKQPFFWIYSDWLRQWADNIIPTAVDNTSIQCSHGKVPVSKITTMKRLSSQAWDKLLSKHGGGPTLSHDDCCWDCLIEGARNVVSADTYRDRRESLKQLARDVLDGNCEDGKYYISRPWLQQWWKRKVLDAPSEADAGPTAAISCPHGQLMPEQAAGAKRVLVPEDFWLFLYEDSISVKPDDPLGCPTFPFDSRECSECSNELSEVACFEDSLRSLVKQRQRQKHEKLFLGKSMPLSLHCKYFLVPSLWISKWRNYVNPSVKNSDKPETLDGVIDSLKCEKHSRLVERPPELVFRRSAIVPRESSASGVTVISENDWKLLCEEWGGNEAKGISAKIENIDESENVLIGSCEELPVCEDQLGSSDKVNNETENGQFVIKTCPEVCESCIGEKESCELMQKLNYCNENITVILVRGKEVPRSILEASKGFVETERRASKRTRKTKNGSSISLKVSASTSIYQLKMMIWESFGVVKENQLLQKGDKTIDIDDEYTTLADVNIFAGDQIIVRDSEIHENRDIAEELYDEKMDTQHTEEGFRGTLLTSNASSQAV 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03281 1051 SUPERFAMILY Ubiquitin-like 943 1010 IPR029071 -
Aip06g03281 1051 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 79 209 - -
Aip06g03281 1051 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 206 321 - -
Aip06g03281 1051 Gene3D Cysteine proteinases 171 209 - -
Aip06g03281 1051 Pfam Ubiquitin carboxyl-terminal hydrolase 214 318 IPR001394 GO:0004843|GO:0016579
Aip06g03281 1051 Gene3D - 940 1011 - -
Aip06g03281 1051 SUPERFAMILY DUSP-like 484 572 IPR035927 -
Aip06g03281 1051 ProSiteProfiles DUSP domain profile. 717 837 IPR006615 GO:0004843
Aip06g03281 1051 Gene3D - 713 834 IPR035927 -
Aip06g03281 1051 Gene3D Cysteine proteinases 210 421 - -
Aip06g03281 1051 CDD Ubl_USP48 941 1044 IPR044743 GO:0004197|GO:0004843|GO:0016579
Aip06g03281 1051 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 321 1021 - -
Aip06g03281 1051 ProSiteProfiles DUSP domain profile. 481 573 IPR006615 GO:0004843
Aip06g03281 1051 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 79 209 - -
Aip06g03281 1051 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 185 200 IPR018200 GO:0004843|GO:0006511
Aip06g03281 1051 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 321 1021 - -
Aip06g03281 1051 ProSiteProfiles DUSP domain profile. 588 690 IPR006615 GO:0004843
Aip06g03281 1051 SUPERFAMILY Cysteine proteinases 183 419 IPR038765 -
Aip06g03281 1051 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 206 321 - -
Aip06g03281 1051 Pfam Ubiquitin carboxyl-terminal hydrolase 321 415 IPR001394 GO:0004843|GO:0016579
Aip06g03281 1051 Coils Coil 466 493 - -
Aip06g03281 1051 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 23 418 IPR028889 -
Aip06g03281 1051 SMART dusp 499 570 IPR006615 GO:0004843
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03281 217 353 Miscellaneous Gene Families AT4G31670 27.528 1.43e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03281 - - gmx:100795556 1422.53