Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03279 ATGGCCACCGCAGTGTACCTCAATTCAGCGCATTCGAATCCTTTTCAAGCTACAAAATGCAAATACGCCGCTCAATCTGTGAGAGCAGTTCCCATACGTGTATTATCAGTGGGGAAGAAGCGATCACGGGAGCTCCAACTCATGATTGATGAGTATGCTGAAAAGATAAAGTATTATTGCAGTTTTGAAGATGTTCAAATTCGGCCAAACCCTAGAAATGCACGTGATCAACGTGCTCAGGTTGATGACGAAGATGCAGCAATGATGAACCATATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGACAAGACATAAGATCCGAGGAAATGGCAGAGTTGGTTGGTAATGCTGGAAATACGGGTGCTTCAAGATTATCTTTTTGCATCGGTGGGCCCTATGGTCATGGGAGAAAAATGAGGGAACGTGCTAACAAATCTATCAAGCTGTCTTCATTGGTCTTAAATCATCAAATCGCACTGCTTGTGCTCATGGAACAGCTCTACAGGTCATGGACAATTTTGAAAGGACAGAACTACCATCACTAG 555 0.436 MATAVYLNSAHSNPFQATKCKYAAQSVRAVPIRVLSVGKKRSRELQLMIDEYAEKIKYYCSFEDVQIRPNPRNARDQRAQVDDEDAAMMNHIRSDDWVVMLDERGQDIRSEEMAELVGNAGNTGASRLSFCIGGPYGHGRKMRERANKSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQNYHH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03279 184 SFLD SPOUT Methyltransferase 6 184 - -
Aip06g03279 184 PANTHER METHYLTRANSFERASE 8 184 IPR003742 GO:0006364|GO:0008168
Aip06g03279 184 Pfam Predicted SPOUT methyltransferase 32 183 IPR003742 GO:0006364|GO:0008168
Aip06g03279 184 CDD RlmH-like 32 184 IPR003742 GO:0006364|GO:0008168
Aip06g03279 184 PIRSF MT_bac 30 184 IPR003742 GO:0006364|GO:0008168
Aip06g03279 184 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 30 184 IPR003742 GO:0006364|GO:0008168
Aip06g03279 184 SUPERFAMILY alpha/beta knot 32 182 IPR029028 -
Aip06g03279 184 Gene3D - 29 184 IPR029026 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03279 K00783 - gmx:100817089 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03279 06 129137866 129142823 Aip06g03279 06 129137866 129142823 ECH