Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03274 ATGAGTTTCAAAAGTGCATTGTTTCCACACTTGGCACTTCTTATCCTATTCTTTTCTGCCTCACATGCATTTGACATTGCACAAATGCTATCACAATATCCAGAGTTTTCATCATTCAAGAAACTCCTAACGGATACAAAGATTGTGGACCAAATCAACAGCCGGAAAAGCGTGACGGTGATGGTGATGGACAACGCTGCTATGAGCGCCGTAGCCGGAAAGTCACCAGATACCATCAAGGCGATCCTGATGACTCACGTGATTCTTGATTATTACGACGAAAGGAAGCTTATGTTAGCGCAAGGCAGCAATGTTTTACTCACCACGCTTTATCAAACCACAGGGCTTGCCGTAAACAATCAAGGATTCATCAAGGTAGCCCTTGTCGGCGAAGGCGAAATCGCCTTCGGCTGCGCGGCACCTGGCTCCCCCTTAGATGTCAAGCTTGTTCAAACTGTAACCACCCAACCCTACGACATCTCAATTCTTCAGGTTACAAAACCTATTATATGGCTTGGCCAAGATGCTGCGAAACCCGGTGGATCTCAGGGACCAAATGCTACAGCGGCAACAGGAACAGGTTCAGTCGCAACCAAACCAGTACCTTCACAAGGTGCTGCAACTTCACCGATTCCGGCACAGGGAGGAGGAGCTTCATCAAGTGCAGTAAAACCAGCATCTTCACAAGGAGCATCTTCACCGATTCCATCACAAGGCGCAAATGCACCCAAAGGAGCAGCTTCAGGGACTACAAAGCCGATTCCGATTCCTCCACAAGCTGCAACTCCGGCCGCCGCGGGAACAAAACCGGTGCCTTCAAGTACAGGACATGGAGCAAATGCGTCTAGTTCGGCCAACGGAACCGCTGTGAATCCAGTGCCTTCAACTGCAAATTCCTCCACATCTGCTGCTCCTACAAAAAGCGGTGGAAATGCACCAAGCCCGGCTCAAGGGCGCGGCGGAAATGCACCAAGTCCGGCACAAGGAAGATCATCGTCAACCTCACCACCATCGTCTTCACCAGGTGCAAGTTCACCAAGTGGAGCAGGCGGTGGTGGTGGTTCGAGTGGTGTGTCACCATCACCGGGTTCAGCAAGTTCAATCGCACCAACACCGGTGGCTGTTTCACCTTCTGGAGACACCATTAACCCAGCTGCACCGAATGCAGGGCCAACATCAAATGCAGGAGCACCTGATTCATCGGGTATTTCTCCGGGTCCAGCCATTGATGGTCCTACAGCAATAAGCCCTTCAGATGCTGCTGCAGACGCACCTCCTTCTTTTGGTAGTTCTTCACGCACCAAGATTAGTTTGTTTGGTGCGGTTATTACGGGTTTTGCTTCTCTTTTCGTAGTTTTGTAA 1362 0.5029 MSFKSALFPHLALLILFFSASHAFDIAQMLSQYPEFSSFKKLLTDTKIVDQINSRKSVTVMVMDNAAMSAVAGKSPDTIKAILMTHVILDYYDERKLMLAQGSNVLLTTLYQTTGLAVNNQGFIKVALVGEGEIAFGCAAPGSPLDVKLVQTVTTQPYDISILQVTKPIIWLGQDAAKPGGSQGPNATAATGTGSVATKPVPSQGAATSPIPAQGGGASSSAVKPASSQGASSPIPSQGANAPKGAASGTTKPIPIPPQAATPAAAGTKPVPSSTGHGANASSSANGTAVNPVPSTANSSTSAAPTKSGGNAPSPAQGRGGNAPSPAQGRSSSTSPPSSSPGASSPSGAGGGGGSSGVSPSPGSASSIAPTPVAVSPSGDTINPAAPNAGPTSNAGAPDSSGISPGPAIDGPTAISPSDAAADAPPSFGSSSRTKISLFGAVITGFASLFVVL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03274 453 MobiDBLite consensus disorder prediction 184 245 - -
Aip06g03274 453 MobiDBLite consensus disorder prediction 273 315 - -
Aip06g03274 453 MobiDBLite consensus disorder prediction 176 431 - -
Aip06g03274 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 10 451 - -
Aip06g03274 453 Gene3D FAS1 domain 23 157 IPR036378 -
Aip06g03274 453 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Aip06g03274 453 SUPERFAMILY FAS1 domain 30 117 IPR036378 -
Aip06g03274 453 MobiDBLite consensus disorder prediction 324 400 - -
Aip06g03274 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 451 IPR033254 -
Aip06g03274 453 Pfam Fasciclin domain 34 121 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03274 Aip-Chr6 129083513 129085318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03274 - - adu:107495242 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03274 06 129083513 129085318 Aip06g03274 06 129083513 129085318 ECH