Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03255 ATGCAACCACAGAAGAGCTCTAGACTCGATTTGGCCGAATTGAAAGCACATATTATAAAGAAGGTTGGAGCTGATAAGTCGAAGTGGTATTTCTATTACTTGAGCAGGTTTTTGAGTCAGAAGCTGGGGAAGAATGAGTTTGACAAGTTGTGCTTTCGGGTACTTGGAAGGGAGAATATTCCATTGCATAATCGTCTTATAAGGTCGATTTTGAGGAATGCTTGCCAAGCAAAATCTCCACCACCAGTACATCCATCCGGTACTCCGAAATCGGTAGCACATGCTACTAACATATCTCCTAGTAGACAAGATGGACATGAACCGAGTGTTACCAACATCCAAAGTCAAAATCAAAATGCACCCATTTGGTCAAATGGGGTTCTGCCAGTCTCCCCGCGCAAAGTTCGGTCCGGAATGCGTGATAGAAAGCTTAAAGATAGACCAAGCCCTCTTGGACCAAATGGGAAAGTTGACTCTGTTGCTCATCAACCCACAGCTACTGAAGACAGTGGTAGTAAGGTTGAAATGGAGAATGGAACACTTAGTCAATGTGATTATCAAAGGCACATACAGCATCTTCAAGCAGTTGCTGAGCTACCTGAGACTGAAATAGGGGACGCTATTCATAGACCTGCTGAAAAATCAAGAATAAATGACAAGGGGCCGACCAAAATATCGTTTGTTGAAGATGGGGAAGAGGTGGAGCAGTTAAACCACCTCAGTTTCTCTAGAGGTTCTCTGACAGCACCGCTTGGGATTCCTTATTGCTCTGCAAGCGTGGGTGGGTCCCGCAAAGCAGTGCCCATTAGTAGCAGTGGTGGTTTTGTTAGTTGTTGTGACAGTGGTAGCTTGCATGATACAGATACCTTGAGACGGCACATGGATGAGATTGCCACGGTTCAAGGTCTTGGTGGTGTTTCTATAGAATGTGCGAACACGTTGAATAACATGGTAGATGTGTACTTGAAACGGTTGATCAGGTCTTGTGTCGATTTAGCTGGAGCTCGTTCTACAAATCAGTCAAGGAAGCCCTCTGTCCCAAAACAGATTCAGGGGAAGGTCATCAACGGCATGTGGCCAAATAATCATTCACATTTGCAGAGCATTGTTGGGCCGGTAGAACCTGAGCCCGAAAACAGACCACCTTGCTCTGTATCTTTGCATGATTTTAACATTGCCATGCAGCTAAATCCACGGCAACTTGGAGAAGATTGGCCTCTGTTGCTAGAGAAAATTTCTATGCAGTCCTTTGAAAGATAA 1260 0.4476 MQPQKSSRLDLAELKAHIIKKVGADKSKWYFYYLSRFLSQKLGKNEFDKLCFRVLGRENIPLHNRLIRSILRNACQAKSPPPVHPSGTPKSVAHATNISPSRQDGHEPSVTNIQSQNQNAPIWSNGVLPVSPRKVRSGMRDRKLKDRPSPLGPNGKVDSVAHQPTATEDSGSKVEMENGTLSQCDYQRHIQHLQAVAELPETEIGDAIHRPAEKSRINDKGPTKISFVEDGEEVEQLNHLSFSRGSLTAPLGIPYCSASVGGSRKAVPISSSGGFVSCCDSGSLHDTDTLRRHMDEIATVQGLGGVSIECANTLNNMVDVYLKRLIRSCVDLAGARSTNQSRKPSVPKQIQGKVINGMWPNNHSHLQSIVGPVEPEPENRPPCSVSLHDFNIAMQLNPRQLGEDWPLLLEKISMQSFER 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03255 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 5 332 IPR024738 GO:0070461
Aip06g03255 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 418 IPR024738 GO:0070461
Aip06g03255 419 MobiDBLite consensus disorder prediction 77 175 - -
Aip06g03255 419 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 418 - -
Aip06g03255 419 MobiDBLite consensus disorder prediction 135 149 - -
Aip06g03255 419 MobiDBLite consensus disorder prediction 160 175 - -
Aip06g03255 419 MobiDBLite consensus disorder prediction 90 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03255 Aip-Chr6 128883697 128885964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03255 - - adu:107495367 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03255 06 128883697 128885964 Aip06g03255 06 128883697 128885964 ECH