Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03229 ATGAGGATTGAGGAAGCAGTTTCAGCTTCGAGCAAGCACCTCGTCTTCGCTTACTATGTTACTGGCCATGGTTTTGGCCACGCCACCAGAGTTGCCGAGGTGGTTCGGCAGTTGATCCTAGCGGGACATGATGTGCATGTAGTAACGGGTGCTCCTGCATTTGTTTTCACCTCTGCAGTTGATTCTCCTCGATTGTTCATTCGTAAGGTGCTTTTGGACTGCGGAGCAGTTCAGGCAGATGCTTTGACAGTTGATCGTCTTGCCTCTTTGGAGAAGTATTCTGAGACAGCAGTGAAGCCTCGTGCGGAAATCTTGGCACAAGAAACAGAATGGCTGAATTCAATTAAAGCTGACTTAGTGGTATCTGATGTTGTCCCAGTAGCATGTCGTGCAGCAGCAGATGCTGGTATTCGGTCTGTCTGTGTAACCAATTTTAGTTGGGACTTCATCTATGCAGAATATGTCATGGCTGCTGGAATACATCATCGCTCAATAGTGTGGCAGATTGCTGAGGACTATTCCCACTGCGAGTTCCTTATCCGACTCCCGGGATATTGCCCAATGCCTGCTTTTCGTGATGTTATTGATGTTCCTCTTGTTGTGAGGAGGTTGCATAAATCTCCAAAAGAGGTGAGGGAGGATCTTGGTGTAGCTGATGATGTGAAGTTAGTTATTCTCAACTTTGGTGGACAGCCAGGAGGATGGCAGCTAAAGGAGGAATTCTTGCCACCTGGCTGGCTGGGCTTGGTTTGTGGAGCTTCTGAGAGCACCAACCTTCCTCCAAACTTCAGAAAACTTGATAAAGAAGCATATACTCCTGATATTATTGCAGCATGTGATTGTATGCTTGGAAAAATCGGATATGGAACTGCAAGTGAAGCCTTGGCATATAAGTGTCCTTTTGTCTTTGTACGTAGAGATTATTTCAACGAAGAGCCTTTCTTGAGAAATATGCTTGAGTTTTATCAATGTGGCGTTGAAATGATTAGGAGGGATTTACTCACTGGTCACTGGAGACCTTATCTTGAACGTGCAGTAAGTTTGAATCCCTGCTATGAAGGAGGCATTAATGGTGCTGAGATGGCTGCCCACATCCTACAGGAGACTGCATTTGGGAAAAATTATGCATCAGATAAGCTTAGTGGGGCAAGAAGATTACGTGATGCTATTATTCTTGGGTATCAACTGCAAAGGGCCACTGGCAGAGACGTCGCAATCCCAGAATGGTATGTAAATGCTGAAAGCCAACTTGGCCGGCGACCATCAGATCGGCCAGCAGATTTTGAAAGTGCTTTGGTTGAATCTGTAATAGATGACTTTGAGATTCTGCACGGAAATGTTCAAGGTTTTCCAGATACTGTGGCTTTCTTACATAGCTTAACTGAATTACATGCGAACCCCAAAAGGCGGGAGAGTAGGGCTGCAGCTTCTCTGTTCAACTGGGAGGAAGAAATATATGTGACAAGAGCTCCTGGAAGGTTAGATGTCATGGGTGGTATTGCTGACTATTCTGGAAGCCTTGTTCTTCAGATGCCAATCAAAGAAGCCTGCCATGTTGCTCTACAAAGGCTCCATCCAAGTAGACATAAGCTGTGGAAACATGCTGCGGCTCGACAGAATGACAAAGGAGGAGAGGCTACTGCTGTTTTACAAATTGTGTCATATGGCTCAGAGCTTGGCTATCGTAGTCCAACATTTGACATGGATTTGTCTGATTTCATGGAAGATGGCAAGCTAATGTCTTATGAGAGAGCAAGGAAATATTTTGCTCAAGATCCATCCCAAAAATGGGCAGCATATGTTGCTGGGGCAATTTTGGTCTTGATGACTGAGATGGGTGTGCGTTTTAACGACAGTATCACCATGATGATTTCATCAGCAGTCCCTGAAGGGAAAGGTGTATCATCTTCTGCATCTGTGGAGGTCGCCAGTATGTCTGCAATTGCAGCTGCTCATGGATTAAATATCGACCCAAGAGACCTCGCTATACTTTGCCAAAAGGTGGAAAATCACATTGTAGGAGCACCATGTGGCGTCATGGATCAGATGACTTCGGCATGTGGTGAAGCCAACAAACTTCTAGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTAGAGATTCCCAACCATATCCGTGTCTGGGGAATTGATTCTGGAATAAGACACAGTATTGGAGGTGCAGACTATGGTTCTGTCAGAATTGGCACCTTTATGGGTCTGAAGATGATTAAGTCTAAAGCTTCTGATGAATTGTCTGATATGCAAACTAATGGGCTGAACAATGATGAAGTGGAACAAGATGATTTAGAACTACTTAAACAAGAAGCTTCCTTAGACTACTTATGTAATTTGCCTCCTCACAGATTTGAGGCTCTTTATGCTAAGCAAATTCCAAACTCCATTATTGGTCAATCATTTTTGGACACCTACAAAAATCACAATGATCCTGTCACTACTATTGATGACAAGCGAACTTATGGAGTGAGATTTCCCACAATGCATCCCATCTATGAAAACTTCAGAGTTAAGACCTTCAAATCACTTCTAACGTCAACAGCTTCAACTGATCAACTTACTGCCTTAGGAGAACTGCTATATCAGTGTCACTATAGCTACAGTGCTTGCGGACTTGGCTCCGACGCAACAGATAGGCTTGTACACTTGGTGCAGGAGGTGCAGCATAGTGCAGCCTCTAAAGCAGAAGACACAACATTATGTGGAGCAAAGATCACTGGTGGAGGTTCTGGTGGAACTGTTTGTGTAATTGGTAGAAACTGCCTCAAGAGCGGTGAACAAATTATTGAGATCCAGCAGAGGTACAAGAAGCAAACTGGTTATTTGCCTTTTATTTTCGAGGGTTCATCGCCTGGTTCAGGAAAGTTCGGGTACCTGAAAATACGCCACCGAACTGGTTCCAGATCCGATGTCAGGATGGGTTACACCAGTGACGAAGGGAGTCCGATATGA 2973 0.4464 MRIEEAVSASSKHLVFAYYVTGHGFGHATRVAEVVRQLILAGHDVHVVTGAPAFVFTSAVDSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAEILAQETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGIHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSPKEVREDLGVADDVKLVILNFGGQPGGWQLKEEFLPPGWLGLVCGASESTNLPPNFRKLDKEAYTPDIIAACDCMLGKIGYGTASEALAYKCPFVFVRRDYFNEEPFLRNMLEFYQCGVEMIRRDLLTGHWRPYLERAVSLNPCYEGGINGAEMAAHILQETAFGKNYASDKLSGARRLRDAIILGYQLQRATGRDVAIPEWYVNAESQLGRRPSDRPADFESALVESVIDDFEILHGNVQGFPDTVAFLHSLTELHANPKRRESRAAASLFNWEEEIYVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRLHPSRHKLWKHAAARQNDKGGEATAVLQIVSYGSELGYRSPTFDMDLSDFMEDGKLMSYERARKYFAQDPSQKWAAYVAGAILVLMTEMGVRFNDSITMMISSAVPEGKGVSSSASVEVASMSAIAAAHGLNIDPRDLAILCQKVENHIVGAPCGVMDQMTSACGEANKLLAMICQPAEIVGLVEIPNHIRVWGIDSGIRHSIGGADYGSVRIGTFMGLKMIKSKASDELSDMQTNGLNNDEVEQDDLELLKQEASLDYLCNLPPHRFEALYAKQIPNSIIGQSFLDTYKNHNDPVTTIDDKRTYGVRFPTMHPIYENFRVKTFKSLLTSTASTDQLTALGELLYQCHYSYSACGLGSDATDRLVHLVQEVQHSAASKAEDTTLCGAKITGGGSGGTVCVIGRNCLKSGEQIIEIQQRYKKQTGYLPFIFEGSSPGSGKFGYLKIRHRTGSRSDVRMGYTSDEGSPI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03229 990 Gene3D Glycogen Phosphorylase B; 18 226 - -
Aip06g03229 990 PRINTS Mevalonate kinase family signature 490 514 - -
Aip06g03229 990 PRINTS Mevalonate kinase family signature 626 648 - -
Aip06g03229 990 PRINTS Mevalonate kinase family signature 669 688 - -
Aip06g03229 990 PRINTS Mevalonate kinase family signature 909 926 - -
Aip06g03229 990 PANTHER MEVALONATE KINASE/GALACTOKINASE 14 969 - -
Aip06g03229 990 SUPERFAMILY Ribosomal protein S5 domain 2-like 478 702 IPR020568 -
Aip06g03229 990 Pfam GHMP kinases N terminal domain 623 688 IPR006204 GO:0005524
Aip06g03229 990 Gene3D - 471 715 IPR014721 -
Aip06g03229 990 PANTHER L-ARABINOKINASE 14 969 - -
Aip06g03229 990 PIRSF Gal_kin_glcsltr 1 974 IPR012369 -
Aip06g03229 990 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 20 366 - -
Aip06g03229 990 Pfam GHMP kinases C terminal 860 927 IPR013750 -
Aip06g03229 990 Pfam Galactokinase galactose-binding signature 479 522 IPR019539 -
Aip06g03229 990 Gene3D - 818 948 IPR036554 -
Aip06g03229 990 SUPERFAMILY GHMP Kinase, C-terminal domain 714 962 IPR036554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03229 Aip-Chr6 128400262 128410587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03229 K12446 - gmx:100787860 1625.14