Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03220 ATGGATTCTGGTTCTCCTCGCAATCGCATTGATCAGTTTTATCCTTCGAAGAAAAGGAAAGCGGCTGCGGTGTCGCCTGCTTCTATGCCTGGGAGATCTGAGAAAGGTGAAAAGAATCATGGGGTTGATGGGTCTCCTAGTGCCAAAGGAACTTTGGACAGTTACTTGGTTTCTTCACAAGATGATTGCCATGCTGCCAGGTTGTCCAATGTGGCCACCCCGGTTGGCGAGTCTTTGGTTAGGCAGCATTCGGTTAAGAGAAATTTAGCTTTAGATGTTAGTAGTTGTATTGACTATGAGCACAGTAAGCTGCCTGTTTTGTCGGCCCAAGGGAATGAGCTGGCACAAGCTTTGCCTTCAGGACTAATGGATGAATCATCGAAGGTGAGTTGCATGGTGGTTGGAGACCCTGGCCAGGAAAAAGGATGGAGTGGTATGGGAATGGGTGTGCCAAACTTGGATGCCAAACGATTTGCAGCAGAGTTTCTGTCCTTGTATTGCAGTGGAGTAGACCAGATTCGTTTGTCGTCGGAAATGAAAGAAGATACTCATACCAGACATTGTTCTCTTACATTAGTAGATAAAAATATTAGCTTGGCGGAGAAGTGTGAGGACCCCACTAGTGAGCCACATTATGGTAGTGAAAACATCTCTAGTGATGATATTCCTAAAGAAATCTGTTCTGGTGTTGTTGCATGTGTCAAGGAGACTCCAAAGTCAACACGTGGAAGCTCAAGTTTTTCACCTGGCTCAGCTTTTTGGAATGAAGCGATTCAAGTTGCTGATGGTTTGTGTGTTCCTGTGACTAATGATTCTTCTATTGTTATGCACAAGATTAATGTGGTGGATGAGCAACATGAAATGGAGAATTCATCTAATTTACAAAGTCATGATGGAAAGCTGAGGGAAGTAATGGATCAATGCAAAAGCAGATTTTGGAAGGGGGAAGCGGGGATGCACACCAAAGATTCCAAGAAAGAAGTCTCTGTTCTTCCTGTGAAGCATTTTGATTTTTCATTTGAGGATAATATTTTGGGTGAAAGTACCCTGCAAGATCGTGGTGTTGGTAATCTGACTAATGTTACTTGTGAGGGTGGTAGACAGTATGAGTGTGGTTCTGTAACAGATCATAGATATCAAAAGATTGATGAAGGGAAGGAGAAGCCTTTAGTAGATGCAGTATGCAAAAGAATGAATTTTTCAAGTCAGGATAATATTAGTATGACATTTAATTCACCCCTCAATGAGGTTGCAATGGCAGTTAATACACATAAATCTGATGAAGCTTGTACTCCGTCAAGTAGTCTGTCGTTTAAGAATCATTTAGAGCTAAACAGCTGGCTTCCACCTGAAATATGCAGTATATATAGAAAGAAAGGAATCTCAAAGCTTTATGAATGGCAGGTTGACTGTCTTCGGGTGGATGGTGTCCTTCAGAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCTGGTAAGAGTATTGTTGCTGAGATTTTAATGCTGCGGAGGGTGATATCTACCGATAAAATGGCAATACTTGTTCTTCCATATGTGTCAATCTGTGCTGAAAAGGCAGAACACCTTGAACGTCTTCTTGAGCCACTTGGTAAATATGTTCGTAGTTATTTTGGGAACCAAGGTGGTGGAACACTTCCTAAAGACACTTCTGTGGCTGTTTGCACGATAGAGAAGGCAAACTCCTTAATCAATAGATTATTGGAAGAGGGCCGTTTATCAGAGATGGGAATTATTGTGATAGATGAGTTGCATATGGTTGGTGATGCAAATAGAGGTTATCTTCTGGAACTCATGTTGACAAAACTTCGTTATGCGGCAGGGGAAGGTATTTCAAAATCAAGTGAAGGAGAAAGTTCAGGTGGAAGCAGCGACAAATCTGATCCTGCTCAAGGTCTGCAAATTGTTGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCACTATACCAGACAGAATTCCGGCCAGTTCCTTTAGAAGAATATATAAAAGTTGGTAATTCCATATATGACAAGAGTATGGAACTTTCTAGAACAATCTCAAAGGCAGCTGATCTTGGTGGTAAAGATCCGGATCATGTTGTTGAGCTTTGTAATGAGGTTGTTCAAGAGGGACAATCAGTCTTAATATTTTGCTCTAGTCGAAAGGGTTGTGAATCGACAGCAAGGCATGTTGGAAAGTTCCTTAAAAGCTTTATTGCTAATATTCAGGAGAACGACTGTGAGTTTGCTGATATTACTTCTGCTATCGACTCGTTGAGAAAGTGTCCTGCTGGGTTGGATCCCATATTAGAGGAAACCCTTCCTTCGGGTGTTGCATTTCACCATGCTGGCCTCACGGTTGAGGAAAGAGAGATAATTGAAACCTGTTACCGAAAAGGACTTTTACGTGTTTTAACTGCCACATCAACCTTAGCGGCTGGGGTTAATCTGCCAGCTAGGAGGGTTATTTTCCGCCAGCCTAGAATTGGTCGTGATTTTATAGATGGGACGAGGTACAAACAGATGGCTGGTCGTGCTGGTCGTACTGGAATTGATACAAAAGGAGAAAGTGTACTTATCTGCAAACCAGAAGAGGTAAAAAGAGTTATGGGGCTTCTTAATGAAAACTGTCCACCATTACATTCCTGTTTATCTGAAGATGTGAATGGAATGACTCATGCAATCTTAGAAGTTGTGGCTGGTGGAATAGTTCAAACAGCTAGTGATGTTCATCGCTACGTTAGATGTACTCTTTTGAACTCCACAAAACCATTCCAAGATGTGGTAAAGTCTGCACAAGAATCCCTCCGCTGGTTGTGCCAAAGAAAGTTTCTTGAATGGAATGAAGACACTAAACTTTACAGTACAACACCTCTTGGACGTGCATCATTTGGCAGCTCTCTCTCTCCAGAAGAATCACTTATTGTGCTCGCTGACCTTTCAAGGGCTAGGGAAGGATTTGTCCTCGCATCTGACCTGCACTTAGTTTACTTGGTCACTCCAATCAATGTTGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGATTTGTGAAATTGTCTCCACTTGACCAGTCAGTTGGTAATCGAGTAGGTGTGACGGAACCATTCTTGATGCGTATGGCACATGGGGCACCTATACGTTCTTATAACAAGTCAAGTGACAGTACAAGAGGGATAAACAATAAACGAGGAAATCAACTCGGGATCTCTGATGCAACTGCACTCTCAGATGATCAAACACTTCGTGTTTGTAGACGATTCTATGTTGCTCTTATTTTGTCACTGCTAGTTCAGGAAACTCCTGTGGGCGAGGTTTGTGAAGCATATAAAGTTGCCAGAGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGAAGGTTTGCATCTATGGTTTCTGCATTCTGTGAGAGGCTTGGCTGGCATGATCTTGAAGGCTTAGTTGCTAAATTTCAGAATCGTGTGTCATTTGGAGTCAGAGCAGAGATTGTAGAGCTTACTGCCATTCCCTATGTTAAAGGTTCTCGAGCTAGAGCACTCTATAAAGCAGGTTTACGAACACCTCTTGCAATTGCTGAAGCTTCGGTACCGGAAATAGTTAAGGCGCTTTTTGAATCGTCATCATGGGCAACAGAAGGTTCTGCGAAACGGAGTTTACAATTTGGTGTGGCGAAGAAGATCAAGAATGGTGCTCGAAAGATTGTTCTTGATAAAGCTGATGAGGCAAGGGTTGCTGCTTTCTCAGCATATAAGTCACTTGGATATGATGTCCCACAGTTTGCTCCTCCCATATTTACTGCTGCTTCTGATTCTACCAAGAAAGAAGCTGGAAGTAACTCTGGAAGTGACACAGCTCACACTAGTCATAGTTTTGTTGATGCAGTCCACAATGATAGTTCTAATGAAGTTGCTTTAGCAAGACAGAGACAAGATTCTGAAAATGATGCTCTAGTTTATCTGAAAGGAAAACCAATCAGTGAGGTTCCATTTAATTTGTCTACTGAAAATTCTGAAGCTCCAGTTATTGGATCTATAAGAAATGAGCCCAATGCTACTTTTGACCCTACCAAGAATGTATACCTGCCCACTCTCTCTGATCAGTTACAGAATCCAACTGATACCACCGTCATACATGATGGGTGCCTAGCTCGTGGTTCAGAGGACCAACATCATAGTAGAATTTTAGCAAGTGGAAATATGGAAAGTTCCACCCAGAGAGGTCCCATTAATGCAGGTAGTAGTCCTGGTGGGATTGATTCATTTCTGGATCTATGGGAAACTTTGCCAGAGTTCTACTTTGATATCCACTATATCAAACGATTGGAACTACACTCTCCTGCTCCTTTTGAAATACATGGCATAGCCATCTGTTGGGAATGCTCTCCTGTATACTACATTAACCTTCCCAGGGATATTTTGTTGTCTATGGGTAAAAGCGATGACAGTTTATCCTTGAGTGCATGCAGTCACAAGCTGAAAGTTTCATCTTCTAATTCTAAGCATGATTTGGAGATTGCCAAGGATAGATGGAGCAGGATTAGTAAAATATTAGGAAAAAGAGATGTCAAAAAGTTCACTTGGAATTTGAAGATTCAAATTCAGGTTTTAAAAAAGCCTGCAGTTTCACTTCAGAGGTTTGGTTGCTCTTACAATCTCGGAAATAATGAAGACTTTGAAATTGTAGATAGTTCATATGTATTGCTACCACGTGTCCTCATTAAAGATGTAATTGACATGTGTATTGTGACTTGGATACTGTGGCCTGATGAAGAGAGGAGCTCAAATCCAAACCTGGAGAAGGAGGTAAAGAAGAGGTTATCCTCTGAGGATGCTGCAGCTGCTAATCAGAGTGGCAGGTGGAAGAATCAGATGCGAAGAGCTGCACATAATGGTTGCTGCCGACGGGTTGCTCAAACAAGAGCATTATGTTCTGTTCTTTGGAAATTACTTGTTTCTGAAGAACTTGTTGAAGTGCTTATGAGAATAGAAATCCCTTTGGTAAATGTTCTTGCTGACATGGAGCTATGGGGAATTGGTGTCGACTTGGAGAGATGCATTCAGGCTCGTAAATTGTTGGTGAAAAGGCTGAAGTATCTTGAAAAGGAAGCTTATAAGCTGGCTGGGATTACATTTTCATTGAATATGCCAGCAGACATTGCAAAGGTGCTCTTTGAACACTTGATGCTGCCTATTCCTGATGGCCGAAATAAGGGGAAAAAACATGCAAGTACTGGCAAGCAATGCTTGGATGCATTAAGGCATGTACATCCCATTGTTCCAATCATTAAAGAGCATCGAACAATGGCAAAGCTCTTGAACACTACACTTGGATCAATTTGTTCTCTAGCTAGGCTATCGGTAAGCACACAGAAGTATACATTACATGGGCATTGGCTTCAGACATCTACAGCAACTGGTCGACTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAACATACAGTAGACTTCAAAATGGAAGAGGATAAAAGCGAAGGAGATGCTGATGAAAATCATTACAGCATTAATGCTCGTGATTTCTTTATTCCTACTCAGGACAACTGGTTACTGTTAACAGCAGACTATTCTCAAATAGAATTGAGGGTGATGGCACACTTCTCTAAAGACTCTTCTCTCATTGAGCTTCTCAGTAAGCCTGATGGTGATGCCTTTACAATGATAGCGGCAAGGTGGATTGGGTGTGCAGAGGATTCTGTCAGCTCCAATGAGAGAGATCAGACTAAAAAGATGGTTTATGGAATTCTTTATGGAATGGGTGCCAATAGCCTTGCTGATCACCTTGATTGCACTTCTGATGAAGCTGCAGAAAAGATTAGTTATTTCAAAAGCTCTTTTCCTGGTGTTGCTTCTTGGCTCAATGAAGTTGTTTCATCTTGTCGTCTCAAAGGATATGTCGAGACTCTTAAGGGAAGAAAACGATTTTTGTCTAAAATAAAATTTGGCAACAGTACAGAAAAATCAAAAGCTCAAAGGCAAGCTGTGAATTCCATTTGTCAGGGATCTGCTGCAGATATAATCAAGATTGCAATGCTAAGAATTTACTCCGTGATTGTCGACAGTGTTGATGGTTCGGATTCTAGTTCTTCTATGGCAACCAAGTTTCACATGCTCAGAGATCGTTGCCGAATTTCATTACAGGTGCATGATGAGTTAGTGCTGGAAGTTGATCCTTCGGTGATAAGGGAAGCTGCCGCGCTGTTAAAGACAAGCATGGAGAATGCAGTCTCACTTCTTGTTCCTCTTCGTGCGAAAGTCAAAGTTGGGAGAACATGGGGATCTTTGGAGGCATTTGCACCGGACAGATAA 6345 0.4184 MDSGSPRNRIDQFYPSKKRKAAAVSPASMPGRSEKGEKNHGVDGSPSAKGTLDSYLVSSQDDCHAARLSNVATPVGESLVRQHSVKRNLALDVSSCIDYEHSKLPVLSAQGNELAQALPSGLMDESSKVSCMVVGDPGQEKGWSGMGMGVPNLDAKRFAAEFLSLYCSGVDQIRLSSEMKEDTHTRHCSLTLVDKNISLAEKCEDPTSEPHYGSENISSDDIPKEICSGVVACVKETPKSTRGSSSFSPGSAFWNEAIQVADGLCVPVTNDSSIVMHKINVVDEQHEMENSSNLQSHDGKLREVMDQCKSRFWKGEAGMHTKDSKKEVSVLPVKHFDFSFEDNILGESTLQDRGVGNLTNVTCEGGRQYECGSVTDHRYQKIDEGKEKPLVDAVCKRMNFSSQDNISMTFNSPLNEVAMAVNTHKSDEACTPSSSLSFKNHLELNSWLPPEICSIYRKKGISKLYEWQVDCLRVDGVLQRRNLVYCASTSAGKSIVAEILMLRRVISTDKMAILVLPYVSICAEKAEHLERLLEPLGKYVRSYFGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDANRGYLLELMLTKLRYAAGEGISKSSEGESSGGSSDKSDPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYDKSMELSRTISKAADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVGKFLKSFIANIQENDCEFADITSAIDSLRKCPAGLDPILEETLPSGVAFHHAGLTVEEREIIETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEVKRVMGLLNENCPPLHSCLSEDVNGMTHAILEVVAGGIVQTASDVHRYVRCTLLNSTKPFQDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLSPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGAPIRSYNKSSDSTRGINNKRGNQLGISDATALSDDQTLRVCRRFYVALILSLLVQETPVGEVCEAYKVARGMVQALQENAGRFASMVSAFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTAIPYVKGSRARALYKAGLRTPLAIAEASVPEIVKALFESSSWATEGSAKRSLQFGVAKKIKNGARKIVLDKADEARVAAFSAYKSLGYDVPQFAPPIFTAASDSTKKEAGSNSGSDTAHTSHSFVDAVHNDSSNEVALARQRQDSENDALVYLKGKPISEVPFNLSTENSEAPVIGSIRNEPNATFDPTKNVYLPTLSDQLQNPTDTTVIHDGCLARGSEDQHHSRILASGNMESSTQRGPINAGSSPGGIDSFLDLWETLPEFYFDIHYIKRLELHSPAPFEIHGIAICWECSPVYYINLPRDILLSMGKSDDSLSLSACSHKLKVSSSNSKHDLEIAKDRWSRISKILGKRDVKKFTWNLKIQIQVLKKPAVSLQRFGCSYNLGNNEDFEIVDSSYVLLPRVLIKDVIDMCIVTWILWPDEERSSNPNLEKEVKKRLSSEDAAAANQSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELVEVLMRIEIPLVNVLADMELWGIGVDLERCIQARKLLVKRLKYLEKEAYKLAGITFSLNMPADIAKVLFEHLMLPIPDGRNKGKKHASTGKQCLDALRHVHPIVPIIKEHRTMAKLLNTTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKMEEDKSEGDADENHYSINARDFFIPTQDNWLLLTADYSQIELRVMAHFSKDSSLIELLSKPDGDAFTMIAARWIGCAEDSVSSNERDQTKKMVYGILYGMGANSLADHLDCTSDEAAEKISYFKSSFPGVASWLNEVVSSCRLKGYVETLKGRKRFLSKIKFGNSTEKSKAQRQAVNSICQGSAADIIKIAMLRIYSVIVDSVDGSDSSSSMATKFHMLRDRCRISLQVHDELVLEVDPSVIREAAALLKTSMENAVSLLVPLRAKVKVGRTWGSLEAFAPDR 2114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03220 2114 SUPERFAMILY Sec63 N-terminal domain-like 1085 1203 - -
Aip06g03220 2114 Gene3D - 1419 1680 IPR036397 GO:0003676
Aip06g03220 2114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 871 IPR027417 -
Aip06g03220 2114 Gene3D - 447 669 IPR027417 -
Aip06g03220 2114 Gene3D - 1044 1188 - -
Aip06g03220 2114 Pfam Helicase conserved C-terminal domain 706 857 IPR001650 -
Aip06g03220 2114 PANTHER DNA POLYMERASE I 464 2112 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 SMART helicmild6 775 857 IPR001650 -
Aip06g03220 2114 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 474 666 IPR014001 -
Aip06g03220 2114 SMART ultradead3 460 679 IPR014001 -
Aip06g03220 2114 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 706 903 IPR001650 -
Aip06g03220 2114 CDD DNA_pol_A_theta 1683 2107 - -
Aip06g03220 2114 Gene3D - 677 877 IPR027417 -
Aip06g03220 2114 Gene3D - 1871 2015 - -
Aip06g03220 2114 SUPERFAMILY DNA/RNA polymerases 1661 2107 IPR043502 -
Aip06g03220 2114 Gene3D - 1809 2104 - -
Aip06g03220 2114 PRINTS DNA-polymerase family A (pol I) signature 1800 1822 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 PRINTS DNA-polymerase family A (pol I) signature 2008 2024 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 PRINTS DNA-polymerase family A (pol I) signature 1917 1942 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 PRINTS DNA-polymerase family A (pol I) signature 1976 1987 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 PRINTS DNA-polymerase family A (pol I) signature 1954 1965 IPR002298 GO:0003887|GO:0006261
Aip06g03220 2114 MobiDBLite consensus disorder prediction 1604 1623 - -
Aip06g03220 2114 PANTHER DNA POLYMERASE THETA 464 2112 - -
Aip06g03220 2114 CDD DEXHc_POLQ-like 448 669 - -
Aip06g03220 2114 Pfam Helix-turn-helix domain 862 953 IPR046931 -
Aip06g03220 2114 Pfam DNA polymerase family A 1690 2105 IPR001098 GO:0003677|GO:0003887|GO:0006260
Aip06g03220 2114 MobiDBLite consensus disorder prediction 619 636 - -
Aip06g03220 2114 Pfam DEAD/DEAH box helicase 477 650 IPR011545 GO:0003676|GO:0005524
Aip06g03220 2114 MobiDBLite consensus disorder prediction 618 637 - -
Aip06g03220 2114 MobiDBLite consensus disorder prediction 1 53 - -
Aip06g03220 2114 CDD SF2_C_Ski2 668 869 - -
Aip06g03220 2114 Gene3D Taq DNA Polymerase; Chain T, domain 4 1683 1792 - -
Aip06g03220 2114 SMART polaultra3 1847 2072 IPR001098 GO:0003677|GO:0003887|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03220 Aip-Chr6 128204243 128224936 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03220 K02349 - gmx:100813857 2967.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03220 06 128204243 128224936 Aip06g03220 06 128204243 128224936 ECH