Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03216 ATGTCTCAGGCCTTTGCAACTGCACTTGAGCCTTTGAAGTTACACTCATGCAGATTCACACACACCCCATCCTTCTTCTCTCTCCCTCCCTTTCCCGCCTTCAACGCCAAACCCTCTCTCACTCTCACACCTCTTCGTCTCTCTCCTTCCCACCCTCCTACTCTCACTCACATCCTCCCTTCCCGTTTTCGGACACCATGCACCACGCAAAAATCAGACATGATTTCGCAGCTTGAGATTGGGAAACCGGAGCGAATCAAGAAACCCGAGAAGCGAGTCAATGGAATATTCTGGATCATACTACTCAACATTGGCATATTCGTTGCTGACCATTTCTTTCAGGTTAATGGCATCAAATCTCTGTACCTGTACCACAACTGGCCTGCTTGGTACCAATTTGTCACAGCAACATTTTGCCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTCGGAAAACTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACTGGTGTTGGAGCAAACCTTGTTTCATGGTTGGTTTTACCAAGAAATACAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTCGGGTTGTTTACTATCAGCGTCCTCGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTTCTAATTTTGGGTCAGTTTGTTATAGAGAAGGTGATGGAAGCAGCCCAAGCTTCAACTTCATTATCAGGAACCTTTCGCGGAGGCTACGCATTGCAGAATGTCAATCATATTGCTCATCTTTCTGGTGCTCTTGTTGGTGTTCTCTTGGTTTGGCTCCTAAGCAAAGTCCCTGCTGATCCCTCAGAACCATAA 861 0.453 MSQAFATALEPLKLHSCRFTHTPSFFSLPPFPAFNAKPSLTLTPLRLSPSHPPTLTHILPSRFRTPCTTQKSDMISQLEIGKPERIKKPEKRVNGIFWIILLNIGIFVADHFFQVNGIKSLYLYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFRGGYALQNVNHIAHLSGALVGVLLVWLLSKVPADPSEP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03216 286 SUPERFAMILY Rhomboid-like 94 280 IPR035952 -
Aip06g03216 286 Pfam Rhomboid family 130 278 IPR022764 GO:0004252|GO:0016021
Aip06g03216 286 Gene3D - 90 281 IPR035952 -
Aip06g03216 286 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 55 283 - -
Aip06g03216 286 PANTHER RHOMBOID-RELATED PROTEIN 55 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03216 Aip-Chr6 128136310 128138647 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03216 - - adu:107495220 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03216 06 128136310 128138647 Aip06g03216 06 128136310 128138647 ECH