Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03198 ATGTCCCGCGTCGCCTCCGACACCGTCGGCAATGGCGCTCTGGTCCCATTCTCCGAAGACACCAAAGACTCACTGGCGGTCTACCCTCTCCACCACGGCCTCGCCCCTCCAATTTCCCGCATTGCCATCTCCTGGGCCCGCGGCAACTCCCTCCGCGTCTCCCTCTTCGCCGCTCCCTCTTCAGAACATTCTCGAACCCCGCAGGATCATTCTGGAGGTAAGGTCCTCGAAGTTAAGCTTGGCGTCGGAGACCCGGAGATTTCCGATTCCCGTTGGCGCCAAATCGCGTACGGCTCCGTTGCCCCCTTTGCCCTGCTCCAGAGTCGCCGGAGTGCACTTTCGGAAATGATCAAGTCTTCTTCGCCGTATCAGATGGATTGGTGGGAGAATGTGCTTGAGTATAGCAAGGACATAACTTCACTTCTCGGTGGACCAAAGTTGCCACCTGGTCCAATAATTGAAGAACGAACTGATATCGTTAAGAAACGTGAGGAGCCAACATGTTTGAAAGCAGCATGGGAGTTGTTGGAAATATTTTATGCAGACAAGCAATCTCAAGCATGGTTACCTGAAAAGCTTGTTGATTGGTTAGCTGATTATGACAGCCTCTTTTCAAGCACACATGAAACAGTTTATGGCAAGCTTGCTCGGTTTCAGAAGGAGCTTGTCAACATACAGGTGCTTGAGGATGACCCTAGATATTGGGAAGTGATGTCATCTGCACTCTCAGTTGGTTGGCTTGATATTGTGGTGAAAATGCTGCGGTTGCATGGATCTTATCAACTAGATCAGCTTAGTAATCGTGAGTTAGAGAATGGGCTTGTGGAGGCAGTTGCTGTTCTTATTTCCAAAATGCCCCGCCTATGTCATGAATCTACTAATGGAAAATTAGGTGAACTCTTTAAATCCAAGCCTGACTTCATCAAGGCCTGGGAAAAATGGAGATCTCAAATTACAAAACTGGATTGTAGTCCATTCTGGATTCAATGTGATAATCATCATACACGTGAGGGATTGAGAAACTTGCTACAAATTATGCTGGGCAACACTGAAAGTCTCTGCATGGCTACATGTTACTGGATTGAGTTGTATATTTCTCATTTTCTTTACATCAGGCCATTTACAACGGGAATAGAAAGCATGTATAATTTGGCACAAAAATGCATCCAACTGAAACCACCATCAAGTAACCATAAGTTGACTGGACTTATAGTTGGAATTCTTGAAGAAAATACTGAGGTAAGCTGTGATTTCTGTTCATGTCATTTGCAATATTATAGGATGGTTGCACATGCGATCGAATTGTTGACTGCAGGGAGTGAGCAAGCAGAGATTGTTCTACATGATGAGCGTTATAATTTGGGGGGAATCAGCATGATAGAACTACATCGTCTTGTGTATGCTCAAGTATTATCATCACATGCCTTGACCTGGCAAATAGCTCCAATATATTTGACATCATGCATGAAGCAAGGAATGGGCTTGTTAGAGAATTTGTTGTACAGGCAATCCATTCAACATAATGACTTGTTGCTAAAGAACATTGAGATCTGCCGCTTGTATGAGCTTGATCATATTAGTTCCGATATCATGAAGGTTGCTGGAGTATATCACTGGAAGCATGGTCATAAAGGTGCTGGTGTATATTGGCTTCAACGGTCCAAAGATACTAGTCGTCTTAATCGGATTGCTCAACAATTATTTGATTCTGTTGGAAAGTCAATCTCTGATGAAAGCTTTAAGCAATGGGAAGGTCTAATTGAATTATTGGGTTCTGAATCCAAGCCTGCTGGGGGTCTTGAATTTTTGCACAAGTATAGGGATTTCAAAAGATCCCTACAGCAGATATATGGTGGAAAGTCAACGGATGCTGCCCGACAAGCAGTAGGCTCTCTCATACTGCTGATGAAAAATCCATCAACCCCTCAGCGCTTTTGGCTGCCGCTTCTGTATGACTCGTTTCTCATCTTCAAAGACCTCCAAATCTCTCGCCTTCCACGACGTCCAATACAGAGATACAAGGAGGGTCATAGAAGATTGTTCTCTTCCAATGTCTCTACTTGCTATTTGCCACCAAACTGCAAACTCCATGGTTCCATTTTGCACTATAGCAGTCACAAAAGGAGAGGAGGACTAAATCTCAGGAACGAGACTGCATTGCACCAAGGCGTGAAGGATTGTTTCGTTGCCATTTTTGCATCTTAG 2205 0.4463 MSRVASDTVGNGALVPFSEDTKDSLAVYPLHHGLAPPISRIAISWARGNSLRVSLFAAPSSEHSRTPQDHSGGKVLEVKLGVGDPEISDSRWRQIAYGSVAPFALLQSRRSALSEMIKSSSPYQMDWWENVLEYSKDITSLLGGPKLPPGPIIEERTDIVKKREEPTCLKAAWELLEIFYADKQSQAWLPEKLVDWLADYDSLFSSTHETVYGKLARFQKELVNIQVLEDDPRYWEVMSSALSVGWLDIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRLCHESTNGKLGELFKSKPDFIKAWEKWRSQITKLDCSPFWIQCDNHHTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPFTTGIESMYNLAQKCIQLKPPSSNHKLTGLIVGILEENTEVSCDFCSCHLQYYRMVAHAIELLTAGSEQAEIVLHDERYNLGGISMIELHRLVYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSIQHNDLLLKNIEICRLYELDHISSDIMKVAGVYHWKHGHKGAGVYWLQRSKDTSRLNRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYRDFKRSLQQIYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSFLIFKDLQISRLPRRPIQRYKEGHRRLFSSNVSTCYLPPNCKLHGSILHYSSHKRRGGLNLRNETALHQGVKDCFVAIFAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03198 734 Pfam Nup85 Nucleoporin 86 655 IPR011502 -
Aip06g03198 734 PANTHER FROUNT PROTEIN-RELATED 13 658 IPR011502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03198 Aip-Chr6 127904477 127911389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03198 K14304 - gmx:100785741 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03198 06 127904477 127911389 Aip06g03198 06 127904477 127911389 ECH