Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03177 ATGGTTGAATCAGTAAGCATTACTGCAAATGAGGATATTCTTGTAGATGATGATGGCAAACCTAAAAGAACCGGGACAGTTTGGACTGCAACTGCACATATAATAACAGCAGTGATTGGTGCTGGAGTTTTGTCATTACCATGGGCCATGGCTCAATTAGGATGGATAATTGGCATATTATCTTTCTTAATTTGTTCTTCTGTTATTCTCTATACCTCCAATCTTTTAACTGATTGTTATAGATCACCAGACTCAGTTACTGGACAAAGAAATTCCACTTATATGGAGGCTGTAAAAGCTAACTTAGGTGGTAGAATGCACTTGATATGTGGAATAGTCCAATATACCAACCTTACTGGAGCTACTATTGGATACACAATAACTACATCCATAAGTATAGTGGCAATACGAAAGATCAATTGCTTCCATAAAAAAGGAGTTGCATCTGATGAATGTCGTTTTTCAAATAATCCATACATGATTGGTTTAGGAATTGTTGAAATCTTTTTGTCCCAAATTCCACATTTCCACAAGATATCTTGGCTCTCAATCATAGCATCAATCATGTCTTTTGGATATGCATTTATTGGCATAGGACTTTCACTTGCTACAATAATACAAGGAAAAGGAAGAAGCACTTATTTAATTGCAAGCAAGGGACAATTTACCCCAGACAAAATTTGGAATATGCTCGTCGCATTAGGAAATATTACCGTTGCAAGTAGCTATTGTCAAATTGCAATAGATATCCAGGACTCGTTGAAGTCATCGACACCAGAAAATGCAGTAATGAAGTTGGCAAATAAGATAGCTATAGTTACAATGACAGTTATCTTTCTGTTATGCGCCTGCTCTGGTTATGCTGCATTTGGCTCAGACACTCCTGGCAGCATCCTCATGAGCTCTGGCTTCAAGGAGCCATTTTGGCTTATTAACATAGCAAATGTCTTCATTGTCATACACCTTCTTGGAGCATACCAGGTACTTTGCCAACCAATTTATGGTGTTGTTGAAACATTAGCTAAGCAACAATGGCCAAGCTCAACTTTTATAATGGAAGAGTTCTCAATGAGCATTGGAAAAGTAAAGTTGAATATTAATTTGTTTAGGCTGGTTTGGAGAACAGTATTTGTTGTGGTAGTGACTATTCTAGCCATGGCAATGCCTTTCTTTAATGAAATTCTAGCACTTCTAGGGGCAACTGCATATTGGCCTTTGGGAATCTATTTTCCAGTGGAGATGTTCATTGCCAAACAGAAATTGAAAAAACGAACATTTCAATGGATTGGACTTCAAACCTTGAATGCTATATTTATGCTACTCGCAATAGCTGTAGCATGTGCAGCCATTCATGGTTTGAATGAATCTCTCAGAAAATACAAACCATTTATGTATAAAGGGTAG 1404 0.3725 MVESVSITANEDILVDDDGKPKRTGTVWTATAHIITAVIGAGVLSLPWAMAQLGWIIGILSFLICSSVILYTSNLLTDCYRSPDSVTGQRNSTYMEAVKANLGGRMHLICGIVQYTNLTGATIGYTITTSISIVAIRKINCFHKKGVASDECRFSNNPYMIGLGIVEIFLSQIPHFHKISWLSIIASIMSFGYAFIGIGLSLATIIQGKGRSTYLIASKGQFTPDKIWNMLVALGNITVASSYCQIAIDIQDSLKSSTPENAVMKLANKIAIVTMTVIFLLCACSGYAAFGSDTPGSILMSSGFKEPFWLINIANVFIVIHLLGAYQVLCQPIYGVVETLAKQQWPSSTFIMEEFSMSIGKVKLNINLFRLVWRTVFVVVVTILAMAMPFFNEILALLGATAYWPLGIYFPVEMFIAKQKLKKRTFQWIGLQTLNAIFMLLAIAVACAAIHGLNESLRKYKPFMYKG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03177 467 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 11 460 - -
Aip06g03177 467 PANTHER OS05G0424000 PROTEIN-RELATED 11 460 - -
Aip06g03177 467 Gene3D Amino acid/polyamine transporter I 20 456 - -
Aip06g03177 467 Pfam Transmembrane amino acid transporter protein 23 447 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03177 Aip-Chr6 127590190 127602454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03177 15 463 Organic Solute Cotransporters AT1G58360 52.097 2.54e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03177 K24917 - gmx:100804643 640.573