Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03160 ATGTTGGTCTTTCAAGCAAGATCTATACGACATGTAGAAGCCGTTCGACATACGTGTGGATCTAGATGGTCATTTACACTTTATTCTCATTACTCAGATACACCTCACAATAAGTCCAAGCTTGCTCCTTTACAGGAAAGAAAAATGATAGACAGGGTCAAGATATTTGCAAAAGGCGGAGATGGTGGGCATGGTTGCTCCAGCTTTCGCCGTAGCCGACATGATCGCTTGGGCAGACCTGATGGTGGCAATGGTGGCAGAGGCGGAGATGTGATTCTGGAATGCTCTCCTAGAGTTTGGGACTTTAGTGGTTTACAACGTCACCTTATAGCTGAGAAAGGAGGACAAGGAACATCGAAGAATAAGATAGGAACAAGGGGTGCAGATAAGGTTGTCCATGTCCCAGTTGGTACTGTACTGCATCTTGTTAGCGGTGATAGTCCTGCTATGGTCAAAATTCAACCCTCTGCAGATGTTGATCCTTGGGAAATTCCTGGTGCACTTGTTGGTGATCTTTCTGACCCTAGCAATGGTGATTTAGTATCCACTGTTTCTGGTGCAGAAAGAGTCAAAGAAATACATGGTACTGGCTGCAGCTTATCAGAAGCTGCTGAAACAAATGCTCAGAAATCTGTAAAATCAAGACAAGTTGCACCAACAGATGAATTTCCTCAGCTTTCAACTGCTAGCGGAACTTCCAAATCTGATGCAGAGGATATAGGAGAAAAACGAGACATGCTATACAATGTTGCTGAGGTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGCATCTACTTTCAAAGACTCAAGGAAGACTTCAACTGCAATGACAGGGTCATGTCAAGACATATCTAATGCCGAGGATCATGACGGCGATCACTCCTCTCTGAGAGCCGGCTTGCCTGGTTCCGATACTGTTCTTGTATTAGAGCTCAAGAGCATTGCTGATGTTAGCTTTGTAGGAATGCCAAATGCTGGGAAAAGCACTCTGCTTGGAGCCATATCAAGGGCTAAGCCTAGTGTTGGTTCCTATGCTTTCACCACTCTTAGGCCTAATTTGGGAAACCTGAACTTTGATGATTTATCAATAACTGTGGCTGATATTCCTGGTCTCATAAAGGGCGCACACCAAAACCGTGGACTCGGACATGCGTTTCTACGCCACATAGAACGTACAAAGGTTCTGGCATATGTGCTGGACTTGGCTGCTGCTTTAAATGGAAAGAAGGGAATTCCGCCATGGGAACAGCTGAGAGACCTGATTCTTGAGCTTGAGTACCATCAGGAAGGTTTATCAAGAAGACCATCGTTGATTGTGGCAAATAAGATTGATGAGGAAGGTGCAGACCAAGTATACGATGAGTTAAAGAGAAGGGTCCATGATGTTCCTATATTTCCGGTGTGTGCTGTTTTGGAGGAAGGGATACCAGAGCTTAAAGCTGGCCTCAAAATGCTTGTCAATGGTGAAATGTCATGTGGTCTTTGCTTAGATCAAATTTTGCTTGCTTAG 1539 0.447 MLVFQARSIRHVEAVRHTCGSRWSFTLYSHYSDTPHNKSKLAPLQERKMIDRVKIFAKGGDGGHGCSSFRRSRHDRLGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGQGTSKNKIGTRGADKVVHVPVGTVLHLVSGDSPAMVKIQPSADVDPWEIPGALVGDLSDPSNGDLVSTVSGAERVKEIHGTGCSLSEAAETNAQKSVKSRQVAPTDEFPQLSTASGTSKSDAEDIGEKRDMLYNVAEVTEEGQQIVIARGGEGGLGNASTFKDSRKTSTAMTGSCQDISNAEDHDGDHSSLRAGLPGSDTVLVLELKSIADVSFVGMPNAGKSTLLGAISRAKPSVGSYAFTTLRPNLGNLNFDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVLDLAAALNGKKGIPPWEQLRDLILELEYHQEGLSRRPSLIVANKIDEEGADQVYDELKRRVHDVPIFPVCAVLEEGIPELKAGLKMLVNGEMSCGLCLDQILLA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03160 512 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 325 497 IPR031167 GO:0005525
Aip06g03160 512 PANTHER BNAA08G29050D PROTEIN 30 509 - -
Aip06g03160 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 495 IPR027417 -
Aip06g03160 512 Pfam 50S ribosome-binding GTPase 327 452 IPR006073 GO:0005525
Aip06g03160 512 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 30 509 IPR045086 GO:0003924|GO:0005525
Aip06g03160 512 PRINTS GTP1/OBG GTP-binding protein family signature 327 347 IPR006073 GO:0005525
Aip06g03160 512 PRINTS GTP1/OBG GTP-binding protein family signature 348 366 IPR006073 GO:0005525
Aip06g03160 512 PRINTS GTP1/OBG GTP-binding protein family signature 375 390 IPR006073 GO:0005525
Aip06g03160 512 PRINTS GTP1/OBG GTP-binding protein family signature 392 410 IPR006073 GO:0005525
Aip06g03160 512 Gene3D - 324 501 IPR027417 -
Aip06g03160 512 ProSiteProfiles Obg domain profile. 47 324 IPR006169 -
Aip06g03160 512 Gene3D GTP1/OBG domain 49 323 IPR036726 -
Aip06g03160 512 MobiDBLite consensus disorder prediction 67 81 - -
Aip06g03160 512 PIRSF GTP-binding_obg 46 502 IPR014100 GO:0000287|GO:0003924|GO:0005525
Aip06g03160 512 MobiDBLite consensus disorder prediction 201 240 - -
Aip06g03160 512 MobiDBLite consensus disorder prediction 201 235 - -
Aip06g03160 512 SUPERFAMILY Obg GTP-binding protein N-terminal domain 49 283 IPR036726 -
Aip06g03160 512 MobiDBLite consensus disorder prediction 64 89 - -
Aip06g03160 512 Pfam GTP1/OBG 50 141 IPR006169 -
Aip06g03160 512 CDD Obg 325 496 IPR031167 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03160 Aip-Chr6 127374743 127376899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03160 - - gmx:100808337 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03160 06 127374743 127376899 Aip06g03160 06 127374743 127376899 ECH