Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03145 ATGGCATCTGCAGAAGCTCGGGCTGCTTTTGCAGTTAAGCGTCAGTTTACTACCCAGGATTTGAGAATGCCTCCTGATTCCTCTGACCATCATCCATCTTCAATTTCAAAAGGTTTGGAATCTGATTGGTCTCCGAGTGAGTCCAATTCAAGTCAAGTGCTCCATGATCGAAATTCTGATAAGTTGCCGGATATGAAATGGTGGCTGCATGTGAAAACCAATGTGGGGGGAGAAGCGAATTATAGGTGCCAACATCAGAATTCTTGGGAATCTGAGCTTGATGCTTTGTGCTCACGGTTTGTTGATGCTGATGTCAAAAGTGGGGGAGATCAATCTGTCAAAAGCTTTGATACTCTTTCATGTGTTGAAAGTGCTAATTCAAGCTCAGAGCAGCCTTGGAATGTCTCTCATAAATGCATGACAAAAAGCAATGATACGAAACTCCCAAAAATTGAGGCTGCTCGGAAAAATGACTTACATTTAACACCTAAAATGATGGGTCAGGAGGACTTCTGGATTTTCGATGATCATTTTGTGGACTGCAGTGCTGATTCCTTTGTCGTTGAACAATGTAAAAGGACATCGTCTGATCTGGAATCGCAATGGATGGGAGCCGAGAAAACTAGGCCTTGGTGGTGTAATGCTGGAAAAGATGAGTTGGGTTCATTGATTTCTCAGAAGTCACTAGAGGAAACTGAGAACTGTGATCTCCCTCAGCCGCAGATTAAGCATTTAAGTGATAGACCATCCCCTAAAAGCAACCGTGTTGATTTTCATAAGAGTCTTCCATCATCCTTAGATCAGAAAGCCATGATGGATTCTTCTATTGCAAATGATTATACATCTGGAATGCTGAATTCTGGCTGTTCATTTCAGGATTCAGAAAGAGCTCTCAGTTCCAGCCAGGGCAAAGATTCTGATTCATGTGACAATGATGACCGAACAATTTCCAAGGACAATCACAAGGCGGAGCTATTAAAAGCATTGTGTCATTCTCAAACGCGCGCAAGAGAGGCTGAAATGGCAGCACAACAAGCCTACATCGAGAAGGAGCACATCGTGAGCCTCTTTTTCAGACAGGCTTCGCAGCTCTTTGCTTACAAGCAATGGCTCCACATGCTTCAGCTCGAGAATCTCTGCCTTCAACTCAGGAACAAGAACCAACCATTGTTGAATCTCCTCCCAGATGTTAAGAAGAGTTATCACAGAGGTGCAAAGAGGAAAATCAGAAGATGTGGGGTTAGAAATTGTGCATTTGCTTTTGCTTTGGGATTAAGTCTTGTTGGTGCTGgtatcCAACCCTTTGTAACATTGTCTCACTTTGACTTCCCTCAAGAGCTTGAGGACAGATATGGCAGTTGGCTAAGTTCCCAGTCACAGGAAGATTTTCAGATATTTGCGGACATATGTTTTAAATCATTTGGAGATAGAGTGAAGTACTGGATAACTTTCAATGAACCAAATCTTGAGATCCCATTCAGTTACCGTAGTGGAATATACCCACCATGTCGTTGCTCTGCTCCTTTTGGGAATTGCACTGATGGAGATTCAGAGAAGGAACCTTTTCTTGCAGCCCATAATATCATACTGTCACATGCTGCTGCTGTTGATATTTACAGAACAAAATACCAGAGTAAGCAAGGGGGGGAAATTGGCATTGTCTTGCATATTGACTGGTTTGAGCCTTTCAGTAATTCCACAGCAGATCAATTAGCAACGAAAAGAGCTCAAGCATTCACCACAAATTGGATTTTAGACCCAGTTATATTGGGGAAGTACCCAAGAGAGATGGAAAAGATTCTAGGACCCATCTTACCAAAATTTTCAAGCATTGACAAAGAAAAACTCAAGAGAGGAGTGGATTTCATTGGCATCAATCATTACTCAAGTTACTATGTCCGAGACTGCTCATCGCCAGCATGCCAAGAACTCTTATAA 1938 0.4231 MASAEARAAFAVKRQFTTQDLRMPPDSSDHHPSSISKGLESDWSPSESNSSQVLHDRNSDKLPDMKWWLHVKTNVGGEANYRCQHQNSWESELDALCSRFVDADVKSGGDQSVKSFDTLSCVESANSSSEQPWNVSHKCMTKSNDTKLPKIEAARKNDLHLTPKMMGQEDFWIFDDHFVDCSADSFVVEQCKRTSSDLESQWMGAEKTRPWWCNAGKDELGSLISQKSLEETENCDLPQPQIKHLSDRPSPKSNRVDFHKSLPSSLDQKAMMDSSIANDYTSGMLNSGCSFQDSERALSSSQGKDSDSCDNDDRTISKDNHKAELLKALCHSQTRAREAEMAAQQAYIEKEHIVSLFFRQASQLFAYKQWLHMLQLENLCLQLRNKNQPLLNLLPDVKKSYHRGAKRKIRRCGVRNCAFAFALGLSLVGAGIQPFVTLSHFDFPQELEDRYGSWLSSQSQEDFQIFADICFKSFGDRVKYWITFNEPNLEIPFSYRSGIYPPCRCSAPFGNCTDGDSEKEPFLAAHNIILSHAAAVDIYRTKYQSKQGGEIGIVLHIDWFEPFSNSTADQLATKRAQAFTTNWILDPVILGKYPREMEKILGPILPKFSSIDKEKLKRGVDFIGINHYSSYYVRDCSSPACQELL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03145 645 MobiDBLite consensus disorder prediction 296 316 - -
Aip06g03145 645 MobiDBLite consensus disorder prediction 231 264 - -
Aip06g03145 645 Pfam Glycosyl hydrolase family 1 427 638 IPR001360 GO:0004553|GO:0005975
Aip06g03145 645 SUPERFAMILY (Trans)glycosidases 428 639 IPR017853 -
Aip06g03145 645 MobiDBLite consensus disorder prediction 14 58 - -
Aip06g03145 645 Gene3D Glycosidases 418 644 - -
Aip06g03145 645 MobiDBLite consensus disorder prediction 29 56 - -
Aip06g03145 645 PANTHER PROTEIN, PUTATIVE-RELATED 1 432 - -
Aip06g03145 645 PANTHER EXPRESSED PROTEIN 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03145 Aip-Chr6 127053586 127058593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03145 430 641 Glycoside Hydrolase AT1G61820 62.911 1.76e-96 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03145 K05350 - gmx:100805767 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03145 06 127053586 127058593 Aip06g03145 06 127053586 127058593 ECH