Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03144 ATGGCTGAGTGGCAGCCCCTCCTCCAATCCATCTTCGTCGGCCTCATTGTCTCTTTCCTCATCGCCAAGCTCATCTCCTCCGTCCTCGCCACCAAGCACGACACTCGCGCCTCCCCTCCCGAACCTCACACAACCGGTGCCGTTCCTGGACCTGGGCTTGGGACCACTTTCACAAGGTCCGATGCTGACGAGACCGAGTCCGTATCGGCTGAGCAGGGGAGCCCGACTCACAGTGGAGTGGGCAGCGACAGTGACGACGACGACGATTGGGAAGGCGTGGAGAGCACGGAACTCGATGAGGCGTTCAGTGCTGCGACCGCGTTTGTTGCGGCCGCGGCGGCGGATCAGCGATCTCAGAAGGTGTCGACGGATGTGCAGCTGCAGCTCTATGGGCTTTACAAGATTGCCACCGAAGGTCCCTGTAGTGTGCCGCAACCCTCAGCGCTGAAAATGACGGCTCGAGCGAAATGGCAAGCATGGCAAAAATTGGGTGCTATGACTCCTGAAGATGCGATGCAGAAGTACATTGATATTGTTACAGAGCTATATCCCTCATGGCTTGATGGAGCTTCACTTTCGAGGGACAAAGGCAGTGATGGTGACAGTGGCGGCTCTGGTTCAGAGTCTAAGGGACCAATGGGACCAGTATTCAGCAGCTTCGTGTTTGAAGAGGACTCTGGTAGTGACTTGAAAATGGACGCCATTCATGGATTTGCCAGAGAAGGGGATGCGGTTAATCTACTCAAGTGTGTTGAAAATGGTGTTTCAGTGAATGTCAAGGACAGTGAAGGTCGGACACCATTACACTGGGCCGTGGATCGTGGCCACCAATTCAAAACATTCCAATTTAATAGAAGACCGTTCTATGCATTTTTACTTATTTCCCAATTGCTGAATTTGAAAATTTGCTTATATTGTCGTGTGTTATACTTTTATAAGGATAATGATGGACAAACACCACTGCATTACGCCGTTGTCTGTGAGCGGGAAGCAATAGCTGAGTATTTAGTGAAGCATAATGCAGACACAAACTTGAAAGACAACGATGGCAGTTCCTCACGTGACATATTTACCAAATGCGGCTTAAGAGGCTTCAGGAACATTTTGCTACCACCAACAGCTGTGAACACCACCCCAAGCGATATTGTCATTGTTTGTAGACATGGTTGCGTGCTTGCATGA 1182 0.5068 MAEWQPLLQSIFVGLIVSFLIAKLISSVLATKHDTRASPPEPHTTGAVPGPGLGTTFTRSDADETESVSAEQGSPTHSGVGSDSDDDDDWEGVESTELDEAFSAATAFVAAAAADQRSQKVSTDVQLQLYGLYKIATEGPCSVPQPSALKMTARAKWQAWQKLGAMTPEDAMQKYIDIVTELYPSWLDGASLSRDKGSDGDSGGSGSESKGPMGPVFSSFVFEEDSGSDLKMDAIHGFAREGDAVNLLKCVENGVSVNVKDSEGRTPLHWAVDRGHQFKTFQFNRRPFYAFLLISQLLNLKICLYCRVLYFYKDNDGQTPLHYAVVCEREAIAEYLVKHNADTNLKDNDGSSSRDIFTKCGLRGFRNILLPPTAVNTTPSDIVIVCRHGCVLA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03144 393 MobiDBLite consensus disorder prediction 193 214 - -
Aip06g03144 393 Pfam Acyl CoA binding protein 99 179 IPR000582 GO:0000062
Aip06g03144 393 ProSiteProfiles Ankyrin repeat profile. 316 348 IPR002110 GO:0005515
Aip06g03144 393 SUPERFAMILY Ankyrin repeat 231 383 IPR036770 -
Aip06g03144 393 Gene3D - 92 204 IPR014352 -
Aip06g03144 393 MobiDBLite consensus disorder prediction 58 80 - -
Aip06g03144 393 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 98 188 IPR000582 GO:0000062
Aip06g03144 393 MobiDBLite consensus disorder prediction 34 91 - -
Aip06g03144 393 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 356 - -
Aip06g03144 393 SMART ANK_2a 316 345 IPR002110 GO:0005515
Aip06g03144 393 SMART ANK_2a 263 302 IPR002110 GO:0005515
Aip06g03144 393 PRINTS Acyl-coA-binding protein signature 121 139 IPR000582 GO:0000062
Aip06g03144 393 PRINTS Acyl-coA-binding protein signature 144 159 IPR000582 GO:0000062
Aip06g03144 393 PRINTS Acyl-coA-binding protein signature 165 182 IPR000582 GO:0000062
Aip06g03144 393 SUPERFAMILY Acyl-CoA binding protein 97 187 IPR035984 GO:0000062
Aip06g03144 393 Gene3D - 223 363 IPR036770 -
Aip06g03144 393 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 356 - -
Aip06g03144 393 Pfam Ankyrin repeats (3 copies) 236 347 IPR002110 GO:0005515
Aip06g03144 393 ProSiteProfiles Ankyrin repeat region circular profile. 316 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03144 Aip-Chr6 127030542 127034791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03144 1 356 Acyl Lipid Metabolism Gene Families AT5G53470 57.143 7.73e-118 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03144 - - aip:107605229 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03144 06 127030542 127034791 Aip06g03144 06 127030542 127034791 ECH