Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03143 ATGGAGAAGAAAACGCCTCTTATATCCTTGGATTCAACATTACACGCAACTTTGCTACTCCTTGCATTAGTTTTCATCCAAGAGGTGCAAGGAATTGGTGTTAATTATGGCACAATAGCAGATAACCTTCCTCCACCAGCTGAAGTAGCAAAATTCCTCTCAAAATCCACCATCATTAACCGGGTGAGACTCTTCGATGCCAACCCCGAACTCCTACGCGCTTTTAAGGACACAAGAATCGAGGTCACAATAACCGTCCCTAACAACCAAATCCCACGTGTAACTAACTTAACCGTTGCACGTGAATGGGTCCAAACCAACGTCCAACCGTTCATCCCTTCAACTAAATTAGTTAGAATTCTCGTTGGCAACGAAGTGTTGTCCACTGCCAACAAACTTTTAATTAGCAACTTAGTCCCTGCAATGCAAACACTCCACGTGGCACTTGTTGAGCTCTCAATAGATAGCCACATAAAAGTTACCACACCACACTCTCTGGGCATTTTGGTAAATTCAACTACACCTTCCGGTGCGAGATTTAGGCAAGGCTATGATACTCATGTGATTAAACCAATGCTTAGTTTTCTTAGAGATTCGAATTCACCATTCATGGTTAACCCTTACCCATTCTTTGGATTTTCCGTTGATACCCTTGATTATGCACTTTTCTTACCCAATTCTGGCATGGTTGATGACGTCACTCATCTACGTTACACCAACATGTTGGATGCACAACTTGATTCTGTTTATTCTGCCATGAAGGTTTTGGGATTCGAAGATGTTGAGATTGTGATCGGTGAAACGGGCTGGCCCACTAAGGGAGACCCGGCCCAAATTGGTGTGGATCCAATGAGTGCTTCGGAGTACAATGGGAATCTCATACGTCATGTCACTTCCGGGGTTGGAACTCCTCTCATGCCTAACCGGACTTTTGAGACTTATATTTTTGCTTTGTTTGATGAGAACTTGAAACCCGGCCCAACATGCGAAAGGAATTTTGGGCTTTTCTGGCCCAATATGACTCCTGTCTATGACATTCATATAATGAGGAACACTGCCATTGGGACCTGCTCCGGGTACTATTGGATCTATATTTTGCTGGAAGAAGAAATACATGTACCTCTCGGAACAGTATCGTCGCATATAAGCAAAAGAAAAAGGAACAATAAGAGCATTATCTACAGACTACAGCATTGA 1197 0.4311 MEKKTPLISLDSTLHATLLLLALVFIQEVQGIGVNYGTIADNLPPPAEVAKFLSKSTIINRVRLFDANPELLRAFKDTRIEVTITVPNNQIPRVTNLTVAREWVQTNVQPFIPSTKLVRILVGNEVLSTANKLLISNLVPAMQTLHVALVELSIDSHIKVTTPHSLGILVNSTTPSGARFRQGYDTHVIKPMLSFLRDSNSPFMVNPYPFFGFSVDTLDYALFLPNSGMVDDVTHLRYTNMLDAQLDSVYSAMKVLGFEDVEIVIGETGWPTKGDPAQIGVDPMSASEYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPTCERNFGLFWPNMTPVYDIHIMRNTAIGTCSGYYWIYILLEEEIHVPLGTVSSHISKRKRNNKSIIYRLQH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03143 398 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 22 354 - -
Aip06g03143 398 Gene3D Glycosidases 30 354 - -
Aip06g03143 398 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Aip06g03143 398 SUPERFAMILY (Trans)glycosidases 32 347 IPR017853 -
Aip06g03143 398 Pfam Glycosyl hydrolases family 17 32 347 IPR000490 GO:0004553|GO:0005975
Aip06g03143 398 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03143 Aip-Chr6 127028501 127030458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03143 14 357 Miscellaneous Gene Families AT3G46570 53.602 4.36e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03143 - - ccaj:109788601 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03143 06 127028501 127030458 Aip06g03143 06 127028501 127030458 ECH