Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03131 ATGGACTCCCAAATCCAGAAGCCTTTCAAAGTATACCTAGTTTCCTCCCCCGACTCGCCCGAGTTCACCCTCCTCACTCGGTCCCTGACTCAGTCCTCGCTCGTCGGGCTCGACGCCGAGTGGAAGCCTGTCCGAACACACCAGTCTTCGTTCCCCGACGTGTCGCTGCTCCAAATCGCCTGCCAACTCGGCGGCGACTCGGAACCTGACTCGGCCGTGTTCCTCCTCGACCTTCTTTCCATCCCTCTCTCCTCGCTATGGAAGCCACTCCGAGAAATGCTGGAATCCCCCGAGACCTTGAAACTTGGTTTCAGATTCAAGCAAGATTTGATATATCTGTCTTCTACTTTCTGTTCCCATGGCTGCGACCCTGGTTTCGATAAGGTGGAGCCGTATTTGGATATCACGAGTCTGTATAATCTTCTGTATCATAAGAAGCATGGACAGAATGCACCCAAGCAGACTAAAAGTTTGTCGAATATATGCATGGAAGTCCTGGGTTTTCCTCTCTCAAAGGAACTCCAATGTAGTGATTGGTCATGTCGTCCTCTTACAGAAGAGCAGATAACATATGCAGCTATGGATGCTCATTGCTTGGTTGAAATATTTAACGTCTTCAATTCAAAAGTTGCCAATACAGGAGATTTTCTTCTCAAGACAACCACATTGTCTAATTCAAAGGAAAATGTTGGGCTGAAAGAGCTTTTTGCAAAGCATGATTCGAATGATAATGTCCTGGGAATGCAATTTTGTGAAGCCTTATCAATTGTTCGAGAGACTATTGGTTCTGATGCTGGTCAGGTGATACCTTCAGCTGAAAGAACAATTCAAAGGTTATCATGTTCGGTTAATGTACCTTCAGATGAATTTTTGAAGATTGTGAAAAAATATGGTGACAGAATTTTGTTAAAGGAGTCTGACAGAAGACCCAAAACCTCAAAAAAGAAAGCAAAAAAGTGGTCATCAACTAATGGCATTAGCAATGTAAAGCATTTGGAAAAATTTGACGACTGGCAAGGTATCCCACCTTGGGATCCATCAGTAGGAGGGGATGGATATCCAAAGTTCCTTTGTGATGTTATGGTTGAAGGCTTGGCTAAACATTTACGATGTGTTGGGATGGATGCTGCAATTCCTTATTCAAAGAAGCCTGAACAAAGGTTGGAGTTGATAGAGCAAGCCCAGAGAGAGAAGAGAGTACTTTTGACACGAGATGCGAAGTTGCTAAGATATGAATATCTAATAAATAACCAAATATATAAAGTGAAGAGTCTTCTGAAAAATGACCAGCTACTTGAGGTCATTGAAGCCTTTCAGCTAAAAATTAGTGAGGATCAGCTGATGTCAAGATGTACAAAATGCAACGGGAGATTTATACAAAAGCCACTGTCTACTGAAGAGGCTATTGAAGCTGCAAAGGGTTTTCAAAAAATTCCAAATTGCTTATTTAACAAGAATATAGAGTTCTGGCAGTGCATGGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCACAATGCAATACAGAAGTTCATTGATGTCTGCAAGCTGAGTGATTAA 1563 0.4274 MDSQIQKPFKVYLVSSPDSPEFTLLTRSLTQSSLVGLDAEWKPVRTHQSSFPDVSLLQIACQLGGDSEPDSAVFLLDLLSIPLSSLWKPLREMLESPETLKLGFRFKQDLIYLSSTFCSHGCDPGFDKVEPYLDITSLYNLLYHKKHGQNAPKQTKSLSNICMEVLGFPLSKELQCSDWSCRPLTEEQITYAAMDAHCLVEIFNVFNSKVANTGDFLLKTTTLSNSKENVGLKELFAKHDSNDNVLGMQFCEALSIVRETIGSDAGQVIPSAERTIQRLSCSVNVPSDEFLKIVKKYGDRILLKESDRRPKTSKKKAKKWSSTNGISNVKHLEKFDDWQGIPPWDPSVGGDGYPKFLCDVMVEGLAKHLRCVGMDAAIPYSKKPEQRLELIEQAQREKRVLLTRDAKLLRYEYLINNQIYKVKSLLKNDQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAIEAAKGFQKIPNCLFNKNIEFWQCMDCHQLYWEGTQYHNAIQKFIDVCKLSD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03131 520 Pfam 3'-5' exonuclease 21 210 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aip06g03131 520 SUPERFAMILY Ribonuclease H-like 10 214 IPR012337 -
Aip06g03131 520 CDD mut-7_like_exo 11 206 IPR037432 GO:0008408
Aip06g03131 520 Pfam Mut7-C RNAse domain 354 511 IPR002782 -
Aip06g03131 520 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 5 517 - -
Aip06g03131 520 Gene3D - 4 214 IPR036397 GO:0003676
Aip06g03131 520 SMART 35exoneu6 11 211 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03131 Aip-Chr6 126802524 126808629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03131 K09122 - gmx:100781231 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03131 06 126802524 126808629 Aip06g03131 06 126802524 126808629 ECH