Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03127 ATGGCAGAGAGCTTTCGTATGGCCGTTGCTGTTATTGGGAATGTTGCTTCAGTGGCCCTTTATGCTGCACCAACGGTGACATTTAAGAGAGTGATAAGGAAGAAAAGCACAGAGGAGTTTTCATGCATACCGTACGTAGTGGCACTGCTGAATTGTTTGTTATTCACATGGTATGGATTGCCAGTGGTGAGTTACAAATGGGAAAACTTTCCTCTCGTCACTGTTAATGGAGTTGGGATTGCTTTTGAGCTCTCCTATGTTCTCATTTATTTCTTCTTTGCTTCCCCAAAAGGAAAGGTGAAGGTAGCCATGACAACAATACCAGTTCTTATAGTGTTCTGCGCCATCGCAATGGCATCGGCTTTCGCCTTCCCCGGTGACCATGGTCACCGGAAGCTACTTGTTGGCAGCGTAGGCCTCGGAGTTTCTGTAGCAATGTATGGATCTCCTTTGGTCGTAATGAAGAAAGTGATACAAACAAAGAGCGTGGAATTCATGCCACTACCTTTATCTTTGTGCTCATTCTTGGCGAGTTCACTGTGGCTAACATATGGAATCCTCATTCGGGATATATTCGTTGCGGGACCAAGTGTGGTTGGAACACCCTTAGGCATTCTCCAACTTGTTCTCCACTGCAGATACTGGAAAAGGAAAGACAATGTGGAACAGCAAAAAGGGGACACAATAGAAAAGTTGGACTTAGAAAAGGGTACTCTTGCAAATAATTATAATGGGGATTTAGTAGGAAAGGGAAATTTGGAAAATAATAATAATGTGACAAACCATAGCAACTGCAATTCTTCATGA 807 0.4325 MAESFRMAVAVIGNVASVALYAAPTVTFKRVIRKKSTEEFSCIPYVVALLNCLLFTWYGLPVVSYKWENFPLVTVNGVGIAFELSYVLIYFFFASPKGKVKVAMTTIPVLIVFCAIAMASAFAFPGDHGHRKLLVGSVGLGVSVAMYGSPLVVMKKVIQTKSVEFMPLPLSLCSFLASSLWLTYGILIRDIFVAGPSVVGTPLGILQLVLHCRYWKRKDNVEQQKGDTIEKLDLEKGTLANNYNGDLVGKGNLENNNNVTNHSNCNSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03127 268 Gene3D - 134 229 - -
Aip06g03127 268 Gene3D - 10 105 - -
Aip06g03127 268 Pfam Sugar efflux transporter for intercellular exchange 134 218 IPR004316 GO:0016021
Aip06g03127 268 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Aip06g03127 268 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 237 - -
Aip06g03127 268 PANTHER RAG1-ACTIVATING PROTEIN 1 4 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03127 Aip-Chr6 126709168 126711543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03127 1 261 Miscellaneous Gene Families AT5G53190 53.383 1.14e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03127 K15382 - gmx:100785477 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03127 06 126709168 126711543 Aip06g03127 06 126709168 126711543 ECH
Aip06g03127 06 126709168 126711543 Aip07g02948 07 115773049 115775255 PCT