Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03073 ATGTGCAAGGATTCATTTACCCACAGAAATATCACTCATTACTGCACATTTCTCCTACAAATATTTATGACCTTGCTCACTCTAACACCATTTCCATCCTCAAGCAAGAGAAAAAAAAACATGCAAATGCAAATAAGTTCCTTGCGCACTCAAACTTTCTTGCATTTTTCACCCGCTCAAAAGTATGGCCGCCACATCATGCCATTGCCAAGAGCTGCCGCCATTGCGGCACCGCCTCCCTTGAAATCCCAGAAAACCCACTCCATGGCACCAGAAAAGATCGAGATTTTCAAGTCACTGGAAAACTGGGCCTCAGAATGTGTGCTACCGATGCTGAAGCCAGTAGAACAATGTTGGCAGCCACAGAATTTGGTGCCAGACTCATCGCAACCCTTTGATGAATTCACCGATGAGGTGAAGAATCTCCGGCAGCGCACTGCGGAGATTCCGGATGATTACTTTGTTGTGTTGGTGGGTGATATGATCACGGAGGAGGCTCTACCTACTTATCAGAGCATGATTAACAACCTAGATGGGGTTGGGGACGAGATCGGGTCAAGCCCAAACCCGTGGGCCGTGTGGACTCGAGCTTGGACGGCTGAAGAGAATAGACATGGGGATTTGCTCAGAACTTATTTGTATCTTTCGGGTCGGGTTGATATGTTGATGATCGAAAAAACAGTGCAATACCTCATTGGAGCTGGCATGGATCCAGGAACCGAAAACAATCCCTATTTGGGGTTTGTGTACACCTCATTTCAAGAACGAGCCACCTTCGTGTCACATGGAAACACAGCCCGGCTAGCAAAGGAGGGTGGTGATCCTGTGCTGGCTCGCATATGTGGGACCATAGCTGCAGATGAAAAGCGCCACGAAAACGCATATCAAAAGATTGTTGAGAAGCTTCTAGAAGTGGATCCCAGTGATGCAGTTGTTGCAATAGGAGACATGATGCAGAAAAAGATCACAATGCCAGCACACTTGATGTACGATGGGAGTGACCCTAAGTTGTTCGAGCACTTCTCCGCCGTGGCGCAGCGATTGGGCGTGTACACGGCCAATGATTATGCTGATATCTTGGAGTTCCTTGTTGGACGGTGGAGATTGGAGAAGCTAGAAGGATTGACGGCTGAGGGAAAACGAGCACAAGATTATGTGTGTGGGTTATCTCAGAGGATCAGGAGGCTGCAAGAGCGCGCTGATGAGCGAGCACGCAACATGAAGAAGTCACATAGCGTGAAGTTCAGCTGGATCTTTAACAAGGAAGTGCTTTTGTGA 1278 0.4797 MCKDSFTHRNITHYCTFLLQIFMTLLTLTPFPSSSKRKKNMQMQISSLRTQTFLHFSPAQKYGRHIMPLPRAAAIAAPPPLKSQKTHSMAPEKIEIFKSLENWASECVLPMLKPVEQCWQPQNLVPDSSQPFDEFTDEVKNLRQRTAEIPDDYFVVLVGDMITEEALPTYQSMINNLDGVGDEIGSSPNPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMLMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYQKIVEKLLEVDPSDAVVAIGDMMQKKITMPAHLMYDGSDPKLFEHFSAVAQRLGVYTANDYADILEFLVGRWRLEKLEGLTAEGKRAQDYVCGLSQRIRRLQERADERARNMKKSHSVKFSWIFNKEVLL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03073 425 CDD Acyl_ACP_Desat 92 400 IPR005067 GO:0006631|GO:0045300
Aip06g03073 425 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 63 424 - -
Aip06g03073 425 PIRSF Dlt9_acylACP_des 42 425 IPR005067 GO:0006631|GO:0045300
Aip06g03073 425 SUPERFAMILY Ferritin-like 81 424 IPR009078 -
Aip06g03073 425 Pfam Fatty acid desaturase 92 419 IPR005067 GO:0006631|GO:0045300
Aip06g03073 425 Gene3D Ribonucleotide Reductase, subunit A 78 425 IPR012348 GO:0016491
Aip06g03073 425 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 63 424 IPR005067 GO:0006631|GO:0045300
Aip06g03073 425 ProSitePatterns Fatty acid desaturases family 2 signature. 342 361 IPR005803 GO:0006633|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03073 Aip-Chr6 125793056 125795426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03073 71 423 Acyl Lipid Metabolism Gene Families AT1G43800 77.528 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03073 K03921 - gmx:100037478 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03073 06 125793056 125795426 Aip06g03073 06 125793056 125795426 ECH