Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02863 ATGTCATACTCAAGGTTCCTCAGCTCAAGTAAAGGCCCTTTGTGGGTTGCAGCTTACTGTTTCAAGCACCTCAAGAAAGCTCAAATCCTTCAGACTCACATTCCTTCCTCTGTTGACAAGATTTTGCAGGATGAAATGAATGCTATCTCCTATAGAGTGCTTGCCTATCTTCTTCTTGGTGTTGTCAGAATATATTCAAAGAAGGCTGAATATTTGTTAGATGATTGCAATGGGATGCTTGTTAGAATCAATAAGTTCGTGATCAAAACAAAAGACAAAGCACCCATGGAAACAATGCGGATGTCTGTTATTATACCAGACAGATTTGAGCTGGATGCTTTTGATCTAGACATACTTGAAGATGCTGGCGGAGGCCATATTGCTTCACAGGAGGAAATTACTCTTAAAGATGTTGTGTGTAGCAATGAGGGATTTGGGCTGTTTTCTCTAGACAAGTTTGAGAAGTTTGATCTTTGTCAAAATATCTGCATTGATGATCATGCTATGTTGGAAGATTTTTGTGAATCACATGAGATGGACGTGGAATATGAATTTTTGCTGCCAAATAGTCCTACTAATTTAATGGAGGACAAGAATATATCTGAAAAGAGCATAGTCCATGTGGGTGAGCCAATGAACTTTGACATGGTTTTGTTAGCTGAAGGAGTAGAAAAAGAACCTGTTGACTTATTTGGTCAAGATCAACAAATTAATGAAATTCTGGCAATTCATGAAGCTGCATCATGCGAGGACAAATTACCTGAAGAAAGAAGTAGAATATCTAGAGATGAATGGGTGGATACCAGTATATTTTCTGGGAGAGTAAAGGAACCTGTGCTATCTGTTGAAGCACTTAATGAATCTCATCAAGTTGATGAAGAACAGAGTGTGGTTCTGGAGACATCAAGCTCATTGTGCCAAATGCAGAAAGAAAGTAATGAAGTTCATGAAATAAGAAATTTTCAAGAAAATACAAAAATGCCCCAAGAAGATAAATCCCATCAGAAAGATTTTTGCATGGACCACAGTAAATCTTCTGGTGCGGAGAAAAACCTTGAAGAAAACACTAAAAGATCTGTTGAAGAGCATGAGAAAGAGAGCAAATTTATGTGTCAAGTAAAGGTTTTACTTGAATGTGAAAAGCTTAAGGTTATTTCAGCGGAGTCAAAAAATCTTGATGCAACACCTCAGTCTAAGCTTCAAGGAAGTTCAGTTAGAAAACAAAAACAAGGAGCTACTTCACCAGAGTTTATGCATATTTCGACACCGGCTTTAAGGGAGCGTGCATCCTTTTCAAGGAAAAGAAAAATTGTTATTGATGGAATGGTAGTGGTGCCTAATGAGGTACTTAAAAAAAGTCTCTATGATACAAGTGACTTAATTGCTAACCGCAGAAAATTCCGCCGTACTTTATTGTCTGTGCAGAGAGAATCTCGCATATCCAATCTTTGTGATGGATTCCACAGACCTCTATTTCCTTGTTCTTCCTTAGATCTTTGCTCCTTATTCTCTAAAAGCAAAATATCAAGTTCCCTCAAAATTGTGGAAAATCAAGAAAACTTAGATGTATCAAACTCTCAAACTGTTGGCAGTCCAGTGCATACAGCAATAGCTCCACAAACCCCTTGTCAGCGCCCAGTTCCCCTTCAAATTTTGGAAATTCCAGCGAGGTTAGATGTGTCAGAAAATGTTGGCAGTCCAGAGCAGATAGAAACTGCACCGAGAACGCCTCCTCAGTTGCAAAAGACAAAACTTAGACCAATTGAGCAACTGGAGAGAAATGAAATTCAGCACAGTGATAATTTAGAACCTTCAATTCCACATGGAACTATAGATAGAGAGCAACCTTTGAGAAGGGACGATGAACTCAATCTGATGGAAGAGGTGATAAATTCATGTGAAACGGAGAATTCAGACTTGTTAGCTGGGTGGTCTGAACGAACCAGGAGAGTTGCGAGGTACTTGCACCGGAGTTATCTGGGCCTAAGGAAACAGACACACGAGCAAGTTGTGAATTTTTCACAAGTTTTGGAAGGACGCGTGAGGAAAGAATGTGCAAGGCTCTTTTATGAATTACTGGTTTTGAGAACCACAAGTTATGTGGGTGTCGAGCAAAATAGTGCTTATGGTGACATACTAATGGTTAAACTCCAAAAATTGGATCAAGCTTTTGGACTTATTGACTTGTAA 2190 0.3895 MSYSRFLSSSKGPLWVAAYCFKHLKKAQILQTHIPSSVDKILQDEMNAISYRVLAYLLLGVVRIYSKKAEYLLDDCNGMLVRINKFVIKTKDKAPMETMRMSVIIPDRFELDAFDLDILEDAGGGHIASQEEITLKDVVCSNEGFGLFSLDKFEKFDLCQNICIDDHAMLEDFCESHEMDVEYEFLLPNSPTNLMEDKNISEKSIVHVGEPMNFDMVLLAEGVEKEPVDLFGQDQQINEILAIHEAASCEDKLPEERSRISRDEWVDTSIFSGRVKEPVLSVEALNESHQVDEEQSVVLETSSSLCQMQKESNEVHEIRNFQENTKMPQEDKSHQKDFCMDHSKSSGAEKNLEENTKRSVEEHEKESKFMCQVKVLLECEKLKVISAESKNLDATPQSKLQGSSVRKQKQGATSPEFMHISTPALRERASFSRKRKIVIDGMVVVPNEVLKKSLYDTSDLIANRRKFRRTLLSVQRESRISNLCDGFHRPLFPCSSLDLCSLFSKSKISSSLKIVENQENLDVSNSQTVGSPVHTAIAPQTPCQRPVPLQILEIPARLDVSENVGSPEQIETAPRTPPQLQKTKLRPIEQLERNEIQHSDNLEPSIPHGTIDREQPLRRDDELNLMEEVINSCETENSDLLAGWSERTRRVARYLHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDILMVKLQKLDQAFGLIDL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02863 729 MobiDBLite consensus disorder prediction 320 361 - -
Aip06g02863 729 Pfam Conserved region of Rad21 / Rec8 like protein 667 713 IPR006909 -
Aip06g02863 729 Gene3D Structural maintenance of chromosome 1. Chain E 646 724 IPR023093 -
Aip06g02863 729 Pfam N terminus of Rad21 / Rec8 like protein 1 91 IPR006910 GO:0005515
Aip06g02863 729 MobiDBLite consensus disorder prediction 395 415 - -
Aip06g02863 729 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 724 - -
Aip06g02863 729 SUPERFAMILY "Winged helix" DNA-binding domain 647 717 IPR036390 -
Aip06g02863 729 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 724 IPR039781 GO:0007062|GO:0008278
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02863 Aip-Chr6 121206006 121216183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02863 K06670 - qsu:112016663 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02863 06 121206006 121216183 Aip06g02863 06 121206006 121216183 ECH