Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02860 ATGGCTTCCTCTGCCGAACACGATAACCCAAGATCTGCAAAAAGAGTTGCTGTTGTTGGTGCTGGGGTAAGTGGGCTTGCTGCGGCTTACACATTGAAATCACATGGTCTGGATGTCACTGTATTCGAAGCTGAAGCAAGAGCTGGTGGGAGGTTAAAAAGTGTCTCACATGATGGTCTAGTTTGGGATGAGGGAGCTAATACAATGACTGCAAGTGAATTGGAGGTTAAAGAATTGATTGAAGCTCTTGGCCTTCAAGGAAAGCAACAGTTTCCAAACTCACAGCATAAGCGCTATATTGCGAAAAACGGAAAACCAGTTCTGGTACCAACAAATCCTGCTGCACTACTGAAGACGCAACTCCTGTCTGCACGCTCAAAGATCCAGCTAATTTTTGAACCATTTATGTGGAAGAGAAGTGACCCTTCTAGTGTGTGTGATGAAAATTACACAGAAAGCGTTGGTAGTTTCTTTGAACGTCATTTTGGGCAAGAGGTCGTGGACTATCTTATTGATCCTTTTGTAGGTGGTACAAGTGCAGCAGATCCGGAATCTCTTTCTGTGATAATGTTTGTGTACCCTATACGTTTCAGGTTTGGCTCCATTATAACTGGAGCTTTGAAGTCAAAGTTATTTTCTAAACCGGATAAAACTAGTCAAAGGAAGGTAAAGATTGCATCAAGAAAAGACAAGCACAAGCGTGGTTCATTTTCTTTCTTGGGTGGGATGCAGACACTGACTGATGCATTGTGCAAAGAGCTCGGTCAAGATGACCTTAAATTAAATTCAAAGGTTTTGACATTAGCGTACAATCATGATGGAAGTTCTTCATCACAAAATTGGTCTATTTCTTGTGCTTCCAACCAAAACATAGAAGGTGTTGATGCTGTAATTATGACGGCTCCCCTATCTAATGTCAAGGAGATGAAGATCACAAAAAGGGCAACCCCGTTCCCACTTAATTTTCTTCCTGAGGTGACCTATGTGCCACTCTCGGTCATAATCACCACCTTTAGAAAGGAGAATGTTAAGAGACCCCTTGAGGGATTTGGAGTTCTTGTTCCTTCAAAAGAGCAACAAAATGGTTTAAAAACTCTTGGTACACTTTTTTCCTCTATGATGTTTCCAGATCGTGCACCCAGTGATTTACATCTCTACACCACCTTTATAGGGGGGACAAGAAACACGGATCTCGCAAAAGCTTCAACTGATGAGCTTAAGAGCATTGTGACTTCTGACCTGAGAAACTTGTTGGGAGCAGAGGGAGAGCCCACATTTGTCAAGTATGTCACGTCATCGATTTCTTTTTGGTGTAAACTCTACTTAGTGTTCTTACATATTACATTTAATGGCAGCCATTTCTATTGGAGCAAAGGCTTTCCTTTGTATGGGCGTAACTATGCATTAGTTCTTCAAGCTATTGACAAAATGGAAAAAGATCTTCCTGGATTTTTCTATGCAGGTAACCACAAAGGTGGGCTCTCAGTTGGCAAAGCAATAGCCTCAGGTTGTAAAGCAGCTGATCTTGTTATCACTTACCTCAACTCTTCTTCAGAGAACAACATAGTGCCTGATAAATGA 1581 0.4168 MASSAEHDNPRSAKRVAVVGAGVSGLAAAYTLKSHGLDVTVFEAEARAGGRLKSVSHDGLVWDEGANTMTASELEVKELIEALGLQGKQQFPNSQHKRYIAKNGKPVLVPTNPAALLKTQLLSARSKIQLIFEPFMWKRSDPSSVCDENYTESVGSFFERHFGQEVVDYLIDPFVGGTSAADPESLSVIMFVYPIRFRFGSIITGALKSKLFSKPDKTSQRKVKIASRKDKHKRGSFSFLGGMQTLTDALCKELGQDDLKLNSKVLTLAYNHDGSSSSQNWSISCASNQNIEGVDAVIMTAPLSNVKEMKITKRATPFPLNFLPEVTYVPLSVIITTFRKENVKRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFPDRAPSDLHLYTTFIGGTRNTDLAKASTDELKSIVTSDLRNLLGAEGEPTFVKYVTSSISFWCKLYLVFLHITFNGSHFYWSKGFPLYGRNYALVLQAIDKMEKDLPGFFYAGNHKGGLSVGKAIASGCKAADLVITYLNSSSENNIVPDK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02860 526 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 429 - -
Aip06g02860 526 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 514 - -
Aip06g02860 526 PRINTS Adrenodoxin reductase family signature 38 51 - -
Aip06g02860 526 PRINTS Adrenodoxin reductase family signature 15 37 - -
Aip06g02860 526 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 463 - -
Aip06g02860 526 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 14 515 IPR004572 GO:0004729|GO:0006779
Aip06g02860 526 SUPERFAMILY FAD/NAD(P)-binding domain 11 514 IPR036188 -
Aip06g02860 526 Pfam Flavin containing amine oxidoreductase 23 511 IPR002937 GO:0016491
Aip06g02860 526 Gene3D protoporphyrinogen ix oxidase, domain 3 109 212 - -
Aip06g02860 526 Gene3D - 15 507 IPR036188 -
Aip06g02860 526 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02860 Aip-Chr6 121114952 121123462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02860 15 86 Acyl Lipid Metabolism Gene Families AT3G23530 38.158 5.86e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02860 K00231 - gmx:547941 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02860 06 121114952 121123462 Aip06g02860 06 121114952 121123462 ECH