Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02858 ATGGTTCTAGGCTCAAAAGGGAAGAACCGGAGAGGTGGCACCGTGCAAATGGATTGCCTTGTTCACATTCAAGAGATTAAGCCATGGCCCCCATCACAATCTCTCAAGTCCCTTCGTTCTGTGTTGATACAATGGGAGAACGGCGAGCGCTCTTCAGGGTCTACCAGTCCTGTTTCCCCAGGTGAAGGGAAAATTGAGTTTAATGAGTCATTTAGGCTTCATGTGACTCTGTTGAAGGACATGTCTGCCAAGCATAGTGTTGCTGATGTGTTTCAAAAGAATTACTTGGAGTTCAATTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTAGGAACTGCCATTATAGACTTGGCGGATTGTGGCGTCCTTAAGGAGCCCTTGAGTGTTAGTGTTCCATTGAACTGCAAGAGGAACTACAGAAACACGGATCAGCCGCTTTTGTATGTTAAAATCGAGCCTACCGAAAAGCATCGGACTAGGTCCTCGTTCAAGGAAAGCAATCCCAAAGAGGCATCGAAGGACAACAAAGGTGGTGACTCTGTGTCTACATTGATGAATGAAGAATATGCTGAGGAAGCTGAGAGTGCTTCCTTTACTGATGATGATGTTTCCTCCCATTCATCTATTGTAGCAGCTACTACCCCGGAAACAAGTGGGAGTATACCTCCTCATTGTGCAGAGAATGGAGCACCTGGAGCAACCCGAAACACAGATAGTAATGAAAAGGAGCATACTTTGGCATCAGAAACAAAGGTTGAAAGATTGCAACAAGATACATGTGAGAAACTAGAGAGTTCATCTAACGCATCATCCGGAGATCTGTCCTCTAATATCGAAAGCCCGGCAAATGGTCAACCAGCTATGGAGAATACTAGTAATCACAGCCCAGTGACAATTCAAAAGCAAGTTGTTGATTCCTCCTCCCCATCCTTGGTGGAAAATTCCAAGAGCAGGTTCACAAACAGTGATCATGAAAATTTGGATCAGGAGGATTTTGAAGAGGATGCTAATTGTAGAAATAAATTTGAAGATGTTAAAACTAACAGTAATGGAAGTACTATTGATATCTATTCAAGGAACACTACATCTCTTAGTAATGGCTTTGTGGACATGACTCCAGGCTCTGTAAACTGTATTAGTTCAGAAATCGATGACAAATTGAATGAGCTGCATGGTGAAGCTGACGAATCTCACATGAAGGGGGAAGGAAGTGCTAAATCTTATTGTAGTTCTGTTGAGGATAGTAATGGAAATGAAATGTCTGATTTGGATATGCAAAACCATGTAGGAAATGAATCAATGGCTCGTGGTGTGAAAGACCAAGTTTCATTAAGTAGCGATATATACTATCTTGGTGGGTCAGAGAGTCATCTGAAAGGCAGTAATATTATGAGAAGTGAGAGATTAAAGCACGTGAAGTCGGTGAGGTCATCAACAGAATCAGCTAGGAGTATTGGATCACTCAGTAGCAATCATCTTTCTGAAGTAAGAGAAAGCCATATAGGAGATGCACAAAACAATGGAGGGAACATCCATGACAAAAGAGATGCTAAGATTTATCCAAGGGAATCCAGATCTACCATTTTTGACAGCAAGGTTGAGCATTTGGAAAACAAGATTAAGATGCTTGAGGGAGAGTTAAGAGAGGCTGCTGCCATTGAAGCTGCTTTATATTCAGTAGTTGCTGAGCATGGCAGTTCCATCAGTAAGGTTCATGCCCCAGCTCGGCGCCTGTCCAGGATGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGGTCTGGGGCTGCTAAAAGTGCTGTTTCAGGTTTAGCACTTGTTGCAAAAGCTTGTGGAAATGATGTCCCAAGATTGACATTTTGGTTATCTAATTCTATTGTGTTGAGAATAATTATAAGCCAATCCACCAGAGACATGGCGCCATCAAGTCCTACCGGTTATAGTATGAGAAGGAAGAGAGCAGAGGGGAATGGAAAAATAGCTCAACCATTGGTATGGAAAGGTCTATCTGCTAGGAAAAGTGAGAAGACAGCATTTGGTGCTTTTGGCAGCTGGGATGACCCAAATGTATTCATCTCAGCACTAGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCAATATGGTGGCAGGTAATTAAAAGCTTTAGAAGAATGTCTACCACATGTGACCAAGAGCAAGGGGATTTATCACTTGACATTTGGAAGAATGCTTTTAGAGAAGCCTGTGATAGGATCTGTCCCATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGTCTCTTCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCAATGTTCAATGCCATCCTTCGTGAATCTGCTGATGACATCCCAACGGATCCTGTATCTGATCCCATTGGTGATCCTAAGGTCCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTGAAAACGGCGATTGGAAACTGGTCTAGATGGCTGACTGATCTATTTGGTATCGATGATGATGATGCGCTTGAAGATAAAGATGATGATGACCATTACAGCAGTGATGGAAGTCAAAATACATCATTCAAGGCCTTCCATCTTCTCAATGCACTGAGTGACCTCATGATGCTCCCTAAGGATATGCTGTTAAACGAATCCATCAGGAAAGAGGTGTGTCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTGGAGAATTTTGTCCCGGATGAATTTTGCCCCGATCCAATTCCACCTGTTGTCTTTGAAGCTCTGGACTCACAGGATGATCTCGAAGATGGAAAGGAGTCTGTCAACTACTATCCATGCATTGCAGCTCCAATCGCATATTCACCTCCCCCTGCAACTTCCATTGCAAGCATTACGGCGGAAGTTGGAAGCGAATCTTACCTGAGAAGAAGTAAATCTTCCGTTATCAGGAAGTCATACACAAGTGACGATGAACTCGATGAATTAAGCTCTCCATTATCTTCTATATTATTTAATGGTTCCTCCTCTCCAGCATCAGTAAAACCCAACTGGAAGTTGAAGGATTGTCGCATTGAATCCAATGTCAGATATGAATTGCTCAGGGATGTCTGGAGGAATAGCGAGTAA 3138 0.4283 MVLGSKGKNRRGGTVQMDCLVHIQEIKPWPPSQSLKSLRSVLIQWENGERSSGSTSPVSPGEGKIEFNESFRLHVTLLKDMSAKHSVADVFQKNYLEFNLYEPRRDKIVKGQLLGTAIIDLADCGVLKEPLSVSVPLNCKRNYRNTDQPLLYVKIEPTEKHRTRSSFKESNPKEASKDNKGGDSVSTLMNEEYAEEAESASFTDDDVSSHSSIVAATTPETSGSIPPHCAENGAPGATRNTDSNEKEHTLASETKVERLQQDTCEKLESSSNASSGDLSSNIESPANGQPAMENTSNHSPVTIQKQVVDSSSPSLVENSKSRFTNSDHENLDQEDFEEDANCRNKFEDVKTNSNGSTIDIYSRNTTSLSNGFVDMTPGSVNCISSEIDDKLNELHGEADESHMKGEGSAKSYCSSVEDSNGNEMSDLDMQNHVGNESMARGVKDQVSLSSDIYYLGGSESHLKGSNIMRSERLKHVKSVRSSTESARSIGSLSSNHLSEVRESHIGDAQNNGGNIHDKRDAKIYPRESRSTIFDSKVEHLENKIKMLEGELREAAAIEAALYSVVAEHGSSISKVHAPARRLSRMYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRIIISQSTRDMAPSSPTGYSMRRKRAEGNGKIAQPLVWKGLSARKSEKTAFGAFGSWDDPNVFISALEKVEAWIFSRIVESIWWQVIKSFRRMSTTCDQEQGDLSLDIWKNAFREACDRICPIRAGGHECGCLSLLPRLIMEQCVARLDVAMFNAILRESADDIPTDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDALEDKDDDDHYSSDGSQNTSFKAFHLLNALSDLMMLPKDMLLNESIRKEVCPMFSAPLIKKILENFVPDEFCPDPIPPVVFEALDSQDDLEDGKESVNYYPCIAAPIAYSPPPATSIASITAEVGSESYLRRSKSSVIRKSYTSDDELDELSSPLSSILFNGSSSPASVKPNWKLKDCRIESNVRYELLRDVWRNSE 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02858 1045 MobiDBLite consensus disorder prediction 217 339 - -
Aip06g02858 1045 ProSiteProfiles C2 NT-type domain profile. 7 159 IPR019448 -
Aip06g02858 1045 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1045 IPR021827 GO:0005643
Aip06g02858 1045 MobiDBLite consensus disorder prediction 154 185 - -
Aip06g02858 1045 MobiDBLite consensus disorder prediction 154 180 - -
Aip06g02858 1045 MobiDBLite consensus disorder prediction 265 321 - -
Aip06g02858 1045 MobiDBLite consensus disorder prediction 241 264 - -
Aip06g02858 1045 MobiDBLite consensus disorder prediction 398 422 - -
Aip06g02858 1045 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1045 - -
Aip06g02858 1045 Coils Coil 537 557 - -
Aip06g02858 1045 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 17 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02858 Aip-Chr6 120999356 121007032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02858 - - gmx:100783487 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02858 06 120999356 121007032 Aip06g02858 06 120999356 121007032 ECH
Aip06g02858 06 120999356 121007032 Aip10g03375 10 132256536 132262434 PCT