Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02854 ATGGTTATGGATAAGCTAAGCCAATATGAACGTGTGTTCAACCACTTCGATGAGAATGGAGACGGCAAGATATCGGCATCGGAGCTGAAGCAATGCGTGGAGGCCGTGGGTGGGGAGTTGTCGACCGAGGAGGCAGAGGTGGCCGTGACATTACTGGATTTGGACGGGGATGGGCTTCTGGGACTCGATGATTTTGTGAGGTTTGTGGAAGGAGGAGAAGAGGAAGAGAAAGTGAATGATTTAAGAGAGGCTTTTAAGATGTATGAGATGGATGGGAGTGGTTGCATCACACCAAAGAGCCTTAAGAGGATGCTTAGCAGGTTAGAGCACCAACGGCGGCAGCAGCGATTCCCTCACACGTTCGCACCGACGCGCTCCGCACTCGTCTCTCCTCTTTCACAGCTCGTCTTTGGCTTTCTTGGCAACGGCGGCAAGCTCCCCATCTGgcgaaagtga 456 0.5154 MVMDKLSQYERVFNHFDENGDGKISASELKQCVEAVGGELSTEEAEVAVTLLDLDGDGLLGLDDFVRFVEGGEEEEKVNDLREAFKMYEMDGSGCITPKSLKRMLSRLEHQRRQQRFPHTFAPTRSALVSPLSQLVFGFLGNGGKLPIWRK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02854 151 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Aip06g02854 151 Gene3D - 3 69 - -
Aip06g02854 151 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Aip06g02854 151 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 4 112 - -
Aip06g02854 151 Gene3D - 70 116 - -
Aip06g02854 151 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Aip06g02854 151 CDD EFh 8 106 IPR002048 GO:0005509
Aip06g02854 151 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Aip06g02854 151 SMART efh_1 44 72 IPR002048 GO:0005509
Aip06g02854 151 SMART efh_1 80 108 IPR002048 GO:0005509
Aip06g02854 151 SMART efh_1 8 36 IPR002048 GO:0005509
Aip06g02854 151 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 4 112 - -
Aip06g02854 151 SUPERFAMILY EF-hand 6 109 IPR011992 -
Aip06g02854 151 Pfam EF-hand domain pair 8 69 IPR002048 GO:0005509
Aip06g02854 151 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02854 Aip-Chr6 120955020 120956331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02854 10 112 EF-hand Containing Proteins AT1G76640 49.057 1.04e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02854 K13448 - fve:105352384 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02854 06 120955020 120956331 Aip06g02854 06 120955020 120956331 ECH