Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02850 ATGGGAGTGACACCAAATATCGCTCCTTCGATGTTATCTGCTGACTTCGCTAATTTGTCGTCGGAGGCTCACCGCATTCTCAATTCCGGCGCCGATTGGCTCCACATGGATGTCATGAGTCATCTCACTTTGTTCTTTTCAAATTCTTCCTCTATTCCATGCAGGCACTTTGTCCCCAATTTAACCATTGGTGCTCCAGTCATTGAAAGTTTGAGAAAGCATACAACGGCATATCTGGACTGTCACATGATGGTTACAAATCCTCTAGATTATGTTGAACCTTTGGGGAAGGCCGGTGCTTCTGGTTTTACATTTCATGTCGAGACTTCTAAAGATAACTGGCAAGAACTTATTCAAATGATAAAGTCACACGGCATGAGACCTGGTGTAGCATTGAATCCAGGGACACCCATTGGCGAGGTTTATCCTCTGGTTGAAGCTGAAAGACCAGTGGAAATGGTTCTTGTGATGACTGTAGAGCCTGGATTTGGTGGACAAAAATTTATGCCGGAGATGATGGATAAGGTACGCATACTGAGAAAGAGGTATCCGTTGCTTGACATAGAGGTTGATGGTGGTTTAGGACCTTCAAACATAGACATGGCGGCGTCTGCAGGTGCAAACTGCATTGTTGCAGGAAGTTCAGTTTTTGGAGCCTCTGAGCCAGCTGAAGTAATATCCTTGCTAAGGAGCTCTGTTCAGAAAGCCTAG 711 0.4515 MGVTPNIAPSMLSADFANLSSEAHRILNSGADWLHMDVMSHLTLFFSNSSSIPCRHFVPNLTIGAPVIESLRKHTTAYLDCHMMVTNPLDYVEPLGKAGASGFTFHVETSKDNWQELIQMIKSHGMRPGVALNPGTPIGEVYPLVEAERPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRKRYPLLDIEVDGGLGPSNIDMAASAGANCIVAGSSVFGASEPAEVISLLRSSVQKA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02850 236 Hamap Ribulose-phosphate 3-epimerase [rpe]. 4 232 IPR026019 GO:0004750|GO:0006098
Aip06g02850 236 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 1 235 - -
Aip06g02850 236 Gene3D Aldolase class I 2 236 IPR013785 -
Aip06g02850 236 SUPERFAMILY Ribulose-phoshate binding barrel 5 235 IPR011060 -
Aip06g02850 236 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 235 IPR000056 GO:0005975|GO:0016857
Aip06g02850 236 CDD RPE 7 230 IPR000056 GO:0005975|GO:0016857
Aip06g02850 236 PIRSF RPE 1 236 IPR026019 GO:0004750|GO:0006098
Aip06g02850 236 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 154 176 IPR000056 GO:0005975|GO:0016857
Aip06g02850 236 Pfam Ribulose-phosphate 3 epimerase family 7 217 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02850 Aip-Chr6 120881732 120885640 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02850 K01783 - gmx:100527490 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02850 06 120881732 120885640 Aip06g02850 06 120881732 120885640 ECH