Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02760 ATGAAATCGAATCCAGAGGTATTGAGAGTGTCAAAACTCACAATACTAAATCCATATTGTGGGATACTTGATGATTCTGCAATTCTGTGCACATCGAGCGAGAATGAGACCCGATTTCAGCCTCACACAAACGTCAGTAACCCACAAACTCTCTTCCTTCTCCGTTGTTCTCTCGAAGAACCGCCGACAGCATCGCCGCCGCGCTCGCCGCGCTCGCCGCCGGTTGGCCCTCCTCATCCTCCTCCACTACTCTTGGTTTTTGTGGAAGCTGGTGTTCCAGTGGATCTGTGCCAAAAGATGGGTAGTACATTCAATCCACAGATTTTAGTGGAAAAACTATCCAAGCTGAATGCTTCACAAACAAGCATAGAGACTTTGTCACATTGGTGCATTTTTCATATGAATAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTTCACTGTTCTCCACGTGACAAGAGATTGGCATTTTTGTATCTTGCAAATGATATTTTACAAAATAGCAGGCGAAAAGGGTCTGAATTTGTAGGTGAATTCTGGAAAGTTCTCCCCGATGCTCTTCGAGATGTGATTGAACATGGTGATGAGTTTGCAAGGAATGCAGCACTTCGGCTGATTAGCATATGGGAAGATAGAAAAGTTTTTGGTTCTCGTGGTCAACTTCTCAAGGAAGAGTTTGGTGGGAAGCATGCGGAGAACAATGACCGTGATGCTAAACCTTTGAACATGAAACTGCGGTCATCTGCTGGGAATGCATTGGACAAAATAGTTGCAGGTTATCGTGTTATTTATGGAGGGCAGACAGATGAGGAGGCTGTATTGAGCAAATGCAGAAATGCCATTAGCTGCGTTGAGAAAACAGACAAGGAAATCGGTCATGATAGTAATTCAGGGCAATTCCATGGATCTGCAGTAGTGGATGAACTCCAGGGACATAATGCCATACTTCGGGATTGCATTGAGCAACTAACAGCTATAGAATCATCTAGAGCTAGCCTTGTATCTCATCTGAGAGAGGCTTTACAGGAACAGGAATTCAAGCTGGGTCAACTCCGAAGCCAGATTCAGGCCGCACGAGTTCAGTCAGAGCAGGCAGGTAGCACCTGTCAACAGTTACTTGGTGGCAACAATATTCAGTCATTACCTGAACAGGTTTCAAAGGAAAATAAATCCTCCATGGCAACTTCAAGTTTTATATCTGGTGATAGGGAACAATCAGCTCCATCAATGTATGCACCACAAATGTCTTTTCCTAAAAGTTCTGGACACATTGACGAAGATCCACGAAAGTCTGCAGCTGCTGCAGTGGCAGCGAAACTTACAGCTTCGACATCATCCGCCCAGATGCTGTCTTATGTGCTTTCTTCCTTAGCATCTGAAGGGGTCATAGGCAATCCGATTAAGGAGTCCACGTCCCCGGCAGATTATCAATCTGAAAAGAGGACTAAGCTTGAGAATGATCAGTCATCTTATGTACCTTCTCAGAATCCTCAACAACCGCAACTCCCTCCGTTCTCTGTTCCTGAATCTATGCAACAAAGTGTGACTATGGCCCCGCAATCTACTCCGAGTGATCAACCACCCCTACCTTCCTCATCTCCTCCTCCATTGCCACCACTACCGCCAATGCCGCAGTATCCTGTGTCACCGTTCATGCAGAATGCTGGATCAATTAGCAGCATGTCATACACCTATGGCATGGCCCAGCCATCATCTATGGCTCCCTATCCGATGGTTGGTGCTTCCATGAATAATGTCCCTTTTACACCTGCTCCAATGAGTACATATCAGGGTTTCCAGGGTTCAGATGGAAATTACTATAACCAACCGACGTCAATGCCTATGGCCCCAATCTCTCGACAATGA 1872 0.4551 MKSNPEVLRVSKLTILNPYCGILDDSAILCTSSENETRFQPHTNVSNPQTLFLLRCSLEEPPTASPPRSPRSPPVGPPHPPPLLLVFVEAGVPVDLCQKMGSTFNPQILVEKLSKLNASQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPRDKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDEFARNAALRLISIWEDRKVFGSRGQLLKEEFGGKHAENNDRDAKPLNMKLRSSAGNALDKIVAGYRVIYGGQTDEEAVLSKCRNAISCVEKTDKEIGHDSNSGQFHGSAVVDELQGHNAILRDCIEQLTAIESSRASLVSHLREALQEQEFKLGQLRSQIQAARVQSEQAGSTCQQLLGGNNIQSLPEQVSKENKSSMATSSFISGDREQSAPSMYAPQMSFPKSSGHIDEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPIKESTSPADYQSEKRTKLENDQSSYVPSQNPQQPQLPPFSVPESMQQSVTMAPQSTPSDQPPLPSSSPPPLPPLPPMPQYPVSPFMQNAGSISSMSYTYGMAQPSSMAPYPMVGASMNNVPFTPAPMSTYQGFQGSDGNYYNQPTSMPMAPISRQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02760 623 MobiDBLite consensus disorder prediction 525 550 - -
Aip06g02760 623 ProSiteProfiles CID domain profile. 101 233 IPR006569 -
Aip06g02760 623 MobiDBLite consensus disorder prediction 507 524 - -
Aip06g02760 623 CDD CID_RPRD_like 106 227 - -
Aip06g02760 623 SUPERFAMILY ENTH/VHS domain 109 215 IPR008942 -
Aip06g02760 623 PANTHER OS01G0925000 PROTEIN 100 623 - -
Aip06g02760 623 Gene3D - 101 228 IPR008942 -
Aip06g02760 623 Coils Coil 336 363 - -
Aip06g02760 623 MobiDBLite consensus disorder prediction 600 623 - -
Aip06g02760 623 MobiDBLite consensus disorder prediction 387 418 - -
Aip06g02760 623 Pfam CID domain 108 219 IPR006569 -
Aip06g02760 623 MobiDBLite consensus disorder prediction 466 550 - -
Aip06g02760 623 SMART 558neu5 108 229 IPR006569 -
Aip06g02760 623 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 100 623 - -
Aip06g02760 623 MobiDBLite consensus disorder prediction 387 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02760 Aip-Chr6 118681775 118694306 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02760 K15559 - gmx:100806108 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02760 06 118681775 118694306 Aip06g02760 06 118681775 118694306 ECH