Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02727 ATGGGGTGCACTTACTCAGTGTATAGAAAGAAGAAATCAAGGTTCCCTGAAGTTGTGATCTTGGCTCCATCAACAAGAATTCCAGTTCAATGTGATCTTCAAAGGGAACTCAAAGGAGTAGTCCCTAAGGATCTTGCTCATAAATTGTCCTCGCTGAGAAATCAGATAGCATTGGTTGCTGAAGATACTGGTGGAACAGCCGTTGCTGAATTGAAGAGAGCTTTGAATGAATACTTATCTCTTCTGATTGGTCTTACCAAGAAAGAGCATGGCCTTGAGGGACTAATTGAATTCAAGTGGAAAAATCTTGAAGATTTTCGACAAGATAGCAGTATAGCAAATGTCTGGTTTGAGATTCTATCTGCTGTTCATCTTTTGGCTATGCTGACGCTATCCGAAGCCGATTCGCTGATGATTCCGAAAGACAATTCAGGCTCTGGATTCAGGGTTGTATGTTCAGATAGCAAGAGAGAAGCAGTTGACTTGTTACTCAAGGCATCCGGATACCTCGAGTTCTGCGTCCGGAATATTCTTACTTGGATACCCGCCGAAATCAAGAAAGTTTTGCCCCAGGACTTGAAGGATGGTGTATTGGAGGCTATAGCTATTCAAGCATTAGGCCAGGGAACTGAAATTCAGCTTGGTCTTGCGGTGGAATCTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAACAATTGCTCTACTTTAGTCAGGCTTATCATTGCTTGACAGGATGTGAACTCAACCAAGGCCATGGAAAGAAGCATCTCAAGTTCATTAAATGGAAATTCCTTGAATCCAAGGCCGCAGCATATTACTACCATGGTCTGATCCTTGACAAGGGTAACGAAGCCAGCAACAACCTCAGCGCCGTTTCTTGTTTTCTTGCGGCACAACAACTTCTGGCGGAAAGCAAGAAGGCTTGCCTAACCTTTTGTCTTGCAGCTCCAGTCACAAGGGCTCCTCCACTCTGGGGTGTTATGAAGCATTTACATCAGAAAATTCCTGATGTTGCATCAAGGAAATCCCAAATGTATGCCTTCCTTTTGGACCAACAGAAGGGTGTTCAAGCATTGCCAGAGTTACCTGAGTTCCAATTGTCATTGCGTCCAGATGACTATGAACTCCCAGAAATTGATCCATCATGGGACAATACAAACTGGGGAACTCTAGGACAGCCATTGAAAGAGCACCTTAGAGATAGTGACGATGAGAAAGAGAATTCATCAACTCATTGA 1248 0.4383 MGCTYSVYRKKKSRFPEVVILAPSTRIPVQCDLQRELKGVVPKDLAHKLSSLRNQIALVAEDTGGTAVAELKRALNEYLSLLIGLTKKEHGLEGLIEFKWKNLEDFRQDSSIANVWFEILSAVHLLAMLTLSEADSLMIPKDNSGSGFRVVCSDSKREAVDLLLKASGYLEFCVRNILTWIPAEIKKVLPQDLKDGVLEAIAIQALGQGTEIQLGLAVESQKATLSVKRRLACEQLLYFSQAYHCLTGCELNQGHGKKHLKFIKWKFLESKAAAYYYHGLILDKGNEASNNLSAVSCFLAAQQLLAESKKACLTFCLAAPVTRAPPLWGVMKHLHQKIPDVASRKSQMYAFLLDQQKGVQALPELPEFQLSLRPDDYELPEIDPSWDNTNWGTLGQPLKEHLRDSDDEKENSSTH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02727 415 Gene3D alix/aip1 like domains 32 395 IPR038499 -
Aip06g02727 415 CDD BRO1_Alix_like 11 375 - -
Aip06g02727 415 MobiDBLite consensus disorder prediction 379 415 - -
Aip06g02727 415 ProSiteProfiles BRO1 domain profile. 18 415 IPR004328 -
Aip06g02727 415 SMART BRO1_2 19 382 IPR004328 -
Aip06g02727 415 MobiDBLite consensus disorder prediction 399 415 - -
Aip06g02727 415 PANTHER UNCHARACTERIZED 1 410 IPR038898 -
Aip06g02727 415 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02727 Aip-Chr6 117608107 117612090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02727 - - gmx:100803541 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02727 06 117608107 117612090 Aip06g02727 06 117608107 117612090 ECH