Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02648 ATGATGGGCGCTGCTACGGTGCTACTCGTCGTTATAGTGGCGGCGATTTGGGTGGCGCAATCACACTCAGAGTACATAGAGTACAACACCACGCAGAGGATCGTCAACGGTCAAATAAACGTTCACTTGGTGCCTCACTCCCACGACGATGTTGGCTGGCTCAAGACCGTTGATCAGTACTACGTCGGCGCCAACAACTCCATTCGTGGTGCATGTGTGCAGAACGTGCTGGATTCTGTGATCTCTGCGCTTTTGGAAGACAAGAATCGCAAATTTATCTATGTTGAGATGGCATTTTTCCAACGATGGTGGAGACAGCAAAGTAAAGCTAAGAAAATTAAAGTGAAGGAGCTTGTTGACTCTGGTCAGCTTGAATTCATAAATGGGGGCATGTGCATGCATGATGAGGCCACCCCGCATTACATTGACCTGATTGATCAGACAACTCTCGGGCATCAATTCATTAAAGATGAATTCGGTAAGACTCCAAGAGTTGGCTGGCAGATCGATCCTTTTGGCCATTCTGCGGTTCAGGCGTACTTGCTTGGCGCTGAGCTGGGATTCGATTCGCTCTTTTTTGCCAGAATTGATTACCAGGATAGAGCCAAGCGATTGAAGGAGAAGATGCTTGAGGTTATTTGGCAGGGTTCTAGGTCTCTTGGTTCTTCTTCACAAATATTTACGGGGATATTTCCCAGGCATTACGATCCTCCTGATGGCTTCACGTTTGAGATCAATGATGTTTCCCCTCCTATTCAGGATGACATTGAACTGTTTGACTATAATGTTCAAGAAAGGGTCAATGACTTTGTAGCTGCAGCCATATATCAGGCTAATGTGACCAGAACCAATCACATTATGTGGGCAATGGGGACAGACTTCCGGTATCAATATGCTGATTCATGGTTCAGGCAGATGGATAAGTTTATTCACTATGTGAATCAGGATGGGCGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATTCAAAATATGCAGCAAATGAGCAATGGCCTCTTAAAGTTGATGATTTCTTCCCATATGCAGATAAACCGAATGCATATTGGACTGGCTATTTTACAAGTAGGCCAGCTTTAAAGGGTTATGTGAGAGTGATGAGTGGTTACTATCAGGCAGCAAGGCAATTAGAATTTTTCAAAGGGAGGAATGCATCTGGACCAAATACTAATTCACTAGCAGAAGCTTTATCAATTGCTCAGCATCATGATGCAGTTAGTGGCACAGAGAGACAACATGTTGCTGCTGATTATGCACTGCGACTGTCATTGGGCTATAAGGAGGCAGAAGTGGTGGTCGCATCTGCCCTTGCTTTCTTGGTAAACCAAAAGTTAAGTTCGCAACAGGTGAAGCCAGTGTCGGACTTACAACAGTGTCCTCTACTCAATATAAGTTACTGTCCTTCATCAGAAGCTACGTTGAGCAATGGAAAAAGCTTGGTGATTGTTGTTTATAACCCACTTGCTTGGAAGAGGGAGGAAGTAATTCGAATTCCTGTTTCCACCACAGACATTTCTGTCAAAGATTCTGCTGGGAATGAAGTTGAGTCTCAAATTCTCCCACTATCCAATGCCACTTCAATCCTAAGAAAATACTATGTCAAAGCGTATGTAGGAAAATCTCCTGGTTCAGAACCAAAGTACTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACATACATAGTCTCCAAGCCTAGACAGACAGGTAATCGTTCAACCATATCCAAGGTGCACAAATCAGAAAGAAGTACAAATACCAGCATAGAAGTTGGACAAGGGAATTTGAAGCTGCTTTATTCTGCAGATGAAAGAAAGCTTACTCATTATGTTAACAGTAGAAATCTTGTTAAAGCATCTGTTGAACAAACATACAGTTATTATTCTGGAAATGATGGAACAGATAAAGATCCTCAGGCTTCTGGGGCATATGTATTCCGCCCAAATGGATCATTTCCAATTAGATCTGATCGCCAGGAATCTTTTACTGTTTTAAGTGGTCCAGTGCTGGATGAAGTTCATCAGCAGCTCAATCCATGGATATCTCAGATTACAAGGATATTCAAGGGAAAGGAACATGCTGAAGTTGAGTTCACAGTTGGGCCTATACCTGTGGATGATAACATTGGGAAAGAACTTATTACCCAGTTTACAACCTCAATGAAGACCAACAAAACATTCTACACAGATTCCAATGGACGTGACTTCATTAAAAGGATTCGAGATTTCCGGACAGACTGGGATCTACAAGTGAACCAACCCATAGCTGGAAACTATTATCCGGTTAACTTAGGAATATATGTGCAAGATAGCAACACAGAACTCTCAGTGTTGGTGGACCGTTCAGTTGGGGTTTCAAGCTTGGTAGACGGTCAAGTAGAGCTCATGCTCCACAGGAGGCTTATCCATGACGATACAAGAGGCGTTGGTGAGGCACTCAATGAAACAGTTTGCATTGCTGGTAGCTGTGAAGGTTTAACCATTCAAGGAAAACTGTACCTTAAAATTGATCCTATAGGTGAAGGTGCTAAGTGGCGTCGAACAGTTGGCCAGGAATTATATTCACCACTGTTGTTGGCATTCACAGAACAGGATGGGGATAATTTGTCAAATTTTCAATCATCAACGTTTTCTGGCATAGATTCTTCATACAGTTTCCCAAACAATACTGCTCTTTTAACACTCCAGGAACTTTACAGTGGAAAAATACTTCTAAGATTGGCTCACCTTTACGAGATTGAGGAGGACAAAGATTATTCAGCAATGGCAAGCGTGGAATTGTTAAAGCTGTTTCCTAACAAGAAGATAAGGAAAGTGACCGAGATGAGTTTGTCTGCTAATCAAGAAAGAGCTGAAATGGAAAAGAAGAGGTTAGCATGGAAAGTAGAAGGCTCCACTAAAGAAACTAAGGTGGTGAGGGGAGGGCCTGTTGATCCTGAAAAGTTGGTGGTTGAACTTGCTCCAATGGAAATTAGGACATTTTTTATTGAATTTGCTTCCCTTCAAACGGTTCCTGAAGCAGAAAATCAAGCGGCAACGTAA 3075 0.4267 MMGAATVLLVVIVAAIWVAQSHSEYIEYNTTQRIVNGQINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALLEDKNRKFIYVEMAFFQRWWRQQSKAKKIKVKELVDSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKDEFGKTPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKMLEVIWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDIELFDYNVQERVNDFVAAAIYQANVTRTNHIMWAMGTDFRYQYADSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDSKYAANEQWPLKVDDFFPYADKPNAYWTGYFTSRPALKGYVRVMSGYYQAARQLEFFKGRNASGPNTNSLAEALSIAQHHDAVSGTERQHVAADYALRLSLGYKEAEVVVASALAFLVNQKLSSQQVKPVSDLQQCPLLNISYCPSSEATLSNGKSLVIVVYNPLAWKREEVIRIPVSTTDISVKDSAGNEVESQILPLSNATSILRKYYVKAYVGKSPGSEPKYWLAFPVSVPPLGFSTYIVSKPRQTGNRSTISKVHKSERSTNTSIEVGQGNLKLLYSADERKLTHYVNSRNLVKASVEQTYSYYSGNDGTDKDPQASGAYVFRPNGSFPIRSDRQESFTVLSGPVLDEVHQQLNPWISQITRIFKGKEHAEVEFTVGPIPVDDNIGKELITQFTTSMKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGIYVQDSNTELSVLVDRSVGVSSLVDGQVELMLHRRLIHDDTRGVGEALNETVCIAGSCEGLTIQGKLYLKIDPIGEGAKWRRTVGQELYSPLLLAFTEQDGDNLSNFQSSTFSGIDSSYSFPNNTALLTLQELYSGKILLRLAHLYEIEEDKDYSAMASVELLKLFPNKKIRKVTEMSLSANQERAEMEKKRLAWKVEGSTKETKVVRGGPVDPEKLVVELAPMEIRTFFIEFASLQTVPEAENQAAT 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02648 1024 Pfam Alpha mannosidase middle domain 356 448 IPR015341 GO:0004559|GO:0006013
Aip06g02648 1024 SUPERFAMILY Families 57/38 glycoside transferase middle domain 355 450 IPR028995 -
Aip06g02648 1024 CDD GH38N_AMII_LAM_like 39 315 - -
Aip06g02648 1024 SMART Alpha_mann_mid_2 356 430 IPR015341 GO:0004559|GO:0006013
Aip06g02648 1024 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 818 IPR011682 GO:0004559|GO:0006013
Aip06g02648 1024 PANTHER ALPHA-MANNOSIDASE 11 1013 - -
Aip06g02648 1024 Gene3D Glycoside hydrolase 38, N terminal domain 39 319 IPR027291 -
Aip06g02648 1024 Gene3D - 885 1012 - -
Aip06g02648 1024 PANTHER ALPHA-MANNOSIDASE 11 1013 - -
Aip06g02648 1024 Pfam Glycosyl hydrolases family 38 N-terminal domain 40 351 IPR000602 GO:0004559|GO:0006013
Aip06g02648 1024 SUPERFAMILY Glycoside hydrolase/deacetylase 28 354 IPR011330 GO:0005975
Aip06g02648 1024 Gene3D Glycoside hydrolase family 38, central domain 399 454 IPR037094 GO:0004559|GO:0006013
Aip06g02648 1024 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 901 1006 IPR041147 -
Aip06g02648 1024 Gene3D - 476 602 IPR013780 -
Aip06g02648 1024 Gene3D Glycoside hydrolase family 38, central domain 320 398 IPR037094 GO:0004559|GO:0006013
Aip06g02648 1024 Gene3D - 603 866 - -
Aip06g02648 1024 SUPERFAMILY Galactose mutarotase-like 458 1009 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02648 Aip-Chr6 116231032 116241068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02648 2 949 Glycoside Hydrolase AT3G26720 72.574 0.0 1457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02648 K01191 - gmx:100795651 1755.73