Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02608 ATGCCGCTATCCGCCGCCACAGCCGGCGCCTCACTGCCGCCCGCGCTAGAAGAGGATCCATCACCACAAGACGGCGACGGTTACGGCGTTATCGACATCCCCGGCGTTGTTTCACTTGACGAGGAGGGATTCCCGTCACAGATCCCTTACGAAGACTGGACAAGCTTCACTGTTGATGCATTCCGTTATGGGTGTATTGAAGGGTGCTCTGCATACTTTCTTAGTCACTTCCATTCCGATCATTATGGTGGCCTTAGCAAGAAATGGTCACATGGCCCCATTTATTGCTCTCCTCTTACAGGCAGGCTTGTTCAAATGTGTCTCTCGGTAAATCCCTTGTACATCCTCCCTTTGGAATTTAATGTTGAATATGTGATTTGTGGTGTCAAAGTGACTTTGTTGGAAGCTAATCATTGCCCCGGTGCAGCGTTGATTCACTTTGGCCTCTCAAACGGGCAATGTTATTTGCATACCGGAGACTTTAGAGCTTGTAAACAAATGCAAGCTTACCATACTCTTGTAAATCAACATGTGAATGTCCTTTACTTAGACACTACATATTGCAACCCAAAGTACAATTTCCCTTCCAAGGAAGACGTACTCAATTATGTTGTCAAAGTTACAAAGAACCAACTTAAAGTGCATCCCAAAACTTTGGTGGTTGTTGGAGCGTATAGTATTGGCAAAGAGTGTGTATATCTTGCAATTTCTAAGGCTCTTGGGGTAAAAATTTATGCAAATGCTTCAAGAAGGAAAATTTTGCTGGCTTTTGGTTGGTCTGAGCTTTCTGATAGTCTGTGTATTAATGGAAATAACACATTTCTCCATGTTCTTCCCATGTCATCTCTCAGATTGGAGTCTTTAAAGGATTACATGAAGACCTACAAGGAAAAATACACAGCAGTATTGGCATTTCGTCCAACAGGTTGGACTTTCAGCGAAAAGATTCGCAATGATCTAGAACTAATTAAACCTATTTCCAAAGGAAATATCACAATATATGGTGTTCCCTACAGTGAGCACTCCAGCTTCACAGAACTGCGAGGTTTTGTTCAGTTTTTGAGGCCTGATAAAATAGTTCCAACTGTGAATGTCGGAAATGCGGCTACTCGAGAAAAGATGCAATCTTACTTCCGAGACTGGTTGAAGGGTTAA 1155 0.4303 MPLSAATAGASLPPALEEDPSPQDGDGYGVIDIPGVVSLDEEGFPSQIPYEDWTSFTVDAFRYGCIEGCSAYFLSHFHSDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYILPLEFNVEYVICGVKVTLLEANHCPGAALIHFGLSNGQCYLHTGDFRACKQMQAYHTLVNQHVNVLYLDTTYCNPKYNFPSKEDVLNYVVKVTKNQLKVHPKTLVVVGAYSIGKECVYLAISKALGVKIYANASRRKILLAFGWSELSDSLCINGNNTFLHVLPMSSLRLESLKDYMKTYKEKYTAVLAFRPTGWTFSEKIRNDLELIKPISKGNITIYGVPYSEHSSFTELRGFVQFLRPDKIVPTVNVGNAATREKMQSYFRDWLKG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02608 384 MobiDBLite consensus disorder prediction 1 24 - -
Aip06g02608 384 Gene3D - 193 341 - -
Aip06g02608 384 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 53 383 - -
Aip06g02608 384 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 53 383 - -
Aip06g02608 384 SUPERFAMILY Metallo-hydrolase/oxidoreductase 67 369 IPR036866 -
Aip06g02608 384 CDD SNM1A-1C-like_MBL-fold 54 190 - -
Aip06g02608 384 Pfam DNA repair metallo-beta-lactamase 262 367 IPR011084 -
Aip06g02608 384 Gene3D - 54 363 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02608 Aip-Chr6 114872439 114876356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02608 K15340 - gmx:100790844 613.609