Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02590 ATGAATGTGATTTTGAATATTGACATAACACAGTTGTCTTCACAAACTGCGGAGCATGATGAAATAGACTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATATTGCAAACCAATGTGTTCACCGGAGGTAAAGGTGATAGAGAACAGAGAATCTATCTCTGGTTTGATCCCACCAAAGAATACCACAGATATTCAGTTCTATGGAACTTGTATCAAGTTGTGTTCTTTGTGGATGATGTACCAATTAGGGTGTTCAAGAACTGCAAGGACTTGGGTGTGAAATTCCCATTTGACCAACCAATGAAAATCTACAACAGCTTATGGAACGCAGATGATTGGGCCACAAGGGGTGGTTTGGAGAAAACAGATTGGTCGAAAGCACCATTCATAGCTTCCTACAAAGGCTTCCACATTGATGGTTGTGAAGCCTCCGTTGAAGCCAAGTTCTGTTCCACTCAAGGTAAGAGATGGTGGGACCAACAAGAATTCAGAGACCTTGATGCTCTTCAATGGAGGAGGCTTAGATGGGTTCGCCAGAAGTTCACTATTTACAACTATTGCAATGATAGAAAGCGTTACCCTACTCTTCCTCCTGAATGCTCTAGAGACCGTGACATTTAA 627 0.4211 MNVILNIDITQLSSQTAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSVLWNLYQVVFFVDDVPIRVFKNCKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVEAKFCSTQGKRWWDQQEFRDLDALQWRRLRWVRQKFTIYNYCNDRKRYPTLPPECSRDRDI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02590 208 Gene3D - 9 208 - -
Aip06g02590 208 Pfam Glycosyl hydrolases family 16 13 128 IPR000757 GO:0004553|GO:0005975
Aip06g02590 208 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 135 IPR000757 GO:0004553|GO:0005975
Aip06g02590 208 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 11 206 - -
Aip06g02590 208 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 155 202 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aip06g02590 208 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 11 206 IPR044791 GO:0004553
Aip06g02590 208 ProSitePatterns Glycosyl hydrolases family 16 active sites. 21 31 IPR008263 GO:0004553|GO:0005975
Aip06g02590 208 SUPERFAMILY Concanavalin A-like lectins/glucanases 15 206 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02590 Aip-Chr6 114394370 114398022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02590 12 208 Glycoside Hydrolase AT5G13870 81.726 2.09e-127 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02590 K08235 - gmx:547775 399.053