Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02540 ATGGGAAAGTTGGGGCCTTTGATCTTAGTGGCTCTGTTATCGTTTCTGTGGTGCTGCCATGCCGTTGTGGAAGGGCTGGGTGTGAATTGGGGAACGCAAGCAACGCACAAGTTGCCACCGGACACGGTGGTGCAGATGCTGAAGGACAATGGGATTCAGAAGGTGAAGCTGTTCGATGCAGAAGAATCAACAATGAGTGCTCTTGCTGGCACTGGAATCGAGGTCATGGTTGCCATACCTAACATCCAGCTTGCTGATATGAATGACAATGATAAAGCCAAACAGTGGGTTAAGAAGAGTGTTACAAAGTACAACTTCAATGGCGGTGTTAACATCAAGTATGTAGCTGTTGGGAACGAGCCATTTTTGAAATCATACAATAATTCATTCTTGAATGTCACATTCCCTGCACTACAAAACATTCAAAATGCACTTAATGAAGCTGGTGTTGGTGATAAGATTAAGGCTACAGTGCCCTTAAATGCTGATGTTTATGAGTCTCCGGCAAACAATCCTGTTCCGTCTTCTGGAACATTCCGGGCTGATATCAATGACCTAATGACCCAGATAGTAGCTTTCCTCAGCAAGAATGGTGCACCATTTACAGTGAACATTTACCCTTTCTTGAGTCTCTATGGGCATGACGATTTCCCTTTTGATTATGCCTTCTTTGATGGTGTCACCAACCCCATAAACGATAACGGGACACCGTACACCAATGTCTTCGATGCGAATTTTGATACCCTTGTTGCCGCTCTCAGCAAAGCAGGGTACGGAGACCTGCCCATAATTGTTGGAGAAGTTGGATGGCCTACTGACGGCGACAAGAACGCCAACACGCGTAATGCTTTGAGGTTCTACAATGGACTCCTGCCAAGGCTTGCAGCCAACAAAGGGACACCCCGCCGCCCTGGATACATCGAAGTCTATCTGTTCGGGCTCCTTGATGAGAATGGAAAGAGCATTCAGCCAGGGAACTTCGAGCGTCACTGGGGGATTTTCGGGTATGATGGGCAGCCTAAGTTCCCGATGGACCTTTCCGGCCAGAATCAGAACAAGATGCTCGTTGATGCGAAAAATGTACAGTACCTCGAACAAGAATGGTGCATGTTTAATCCTAATGCTAAAGATCTCAGCAAGCTCGGGGAAAGTATCACTTATGCCTGCACCAATGGGGATTGCACTGCACTTGGCTATGGATCTTCATGCAACAATTTGGATGCTAATGGGAATGCTTCATATGCATTTAACATGTATTTTCAGATGCAAAATCAGAACCTTCAAGCCTGCAATTTTGGAGGTTTGGCGAAGCTTTCGTTGACAAACATTTCAACCGACACCTGCAATTTTCCCATTCAGATAAAGTCTTCATCACCACCCTCTTTGATGAGAGAGAGAGGGACGCCGTTGACGCTATCAGGGAGGAAGGAAGAACTGCACGAGAGCCAGGGGAGGGGGAGCCTCTGCTGCGTCGCCGCCGTGCCTCCATCACCGCCGAACCGCTTTGCTAATGCTAACTCTTTCGCATCTAGTCGGCGTCGAGGGAACCGTCACCGTCGCGGCCATGGGCATGGGTTTCAAAGGGAAGAGAACACGATGAggagaggaggagctgtgtcccgcttctgccgctgtcatcgtgctcaacctccgcgccaggtcatcgtcgtcgtcgttgtggtcagaagctgccactgtcgctgtttgggtccgccgtggggaggagcagcgctgacgtcgctgtaa 1746 0.4387 MGKLGPLILVALLSFLWCCHAVVEGLGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDAEESTMSALAGTGIEVMVAIPNIQLADMNDNDKAKQWVKKSVTKYNFNGGVNIKYVAVGNEPFLKSYNNSFLNVTFPALQNIQNALNEAGVGDKIKATVPLNADVYESPANNPVPSSGTFRADINDLMTQIVAFLSKNGAPFTVNIYPFLSLYGHDDFPFDYAFFDGVTNPINDNGTPYTNVFDANFDTLVAALSKAGYGDLPIIVGEVGWPTDGDKNANTRNALRFYNGLLPRLAANKGTPRRPGYIEVYLFGLLDENGKSIQPGNFERHWGIFGYDGQPKFPMDLSGQNQNKMLVDAKNVQYLEQEWCMFNPNAKDLSKLGESITYACTNGDCTALGYGSSCNNLDANGNASYAFNMYFQMQNQNLQACNFGGLAKLSLTNISTDTCNFPIQIKSSSPPSLMRERGTPLTLSGRKEELHESQGRGSLCCVAAVPPSPPNRFANANSFASSRRRGNRHRRGHGHGFQREENTMRRGGAVSRFCRCHRAQPPRQVIVVVVVVRSCHCRCLGPPWGGAALTSL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02540 581 MobiDBLite consensus disorder prediction 503 528 - -
Aip06g02540 581 Gene3D Glycosidases 25 354 - -
Aip06g02540 581 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
Aip06g02540 581 Gene3D - 362 458 - -
Aip06g02540 581 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 469 IPR044965 GO:0004553|GO:0005975
Aip06g02540 581 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Aip06g02540 581 SMART X8_cls 367 450 IPR012946 -
Aip06g02540 581 Pfam X8 domain 368 436 IPR012946 -
Aip06g02540 581 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 13 469 - -
Aip06g02540 581 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02540 Aip-Chr6 112561569 112566886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02540 8 454 Miscellaneous Gene Families AT2G19440 71.365 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02540 - - gmx:100815300 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02540 06 112561569 112566886 Aip06g02540 06 112561569 112566886 ECH
Aip06g02540 06 112561569 112566886 Aip10g03459 10 133084328 133087284 PCT