Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02527 ATGGCAACTCCAATTCCCGAACCCGTTTCTTATGACTCGACCCGGATTAAACCGCTCCAAGACCGAGTCGCAATCGTCACCGGCTCTTCTCGCGGAATCGGCCGAGAAATCGCGATTCATCTCGCCTCACTCGGCGCCCTAGTCGTCGTCAACTACACCTCCAGCTCGTCCCAAGCCGACTCAGTCGTCGCTCAGATCAACTCCGCCGCCGATTCTCCGCCGCGAGCGGTCGCAGTCAAAGCCGACATCTCAAACCCTGACGACGTCAAATCGCTCTTCGATTCCGCAGAGCGAGCCTTCGACTCGGAGGTCCAAATACTGGTGAATTCCGCCGGTATCCTCGAAGGAACATACCCAACGGTGGCGAACACCGACGTGGAGACCTTCGACAAGATCTTCGCGGTGAACACCCGAGGCGCGTTCCTGTGCTGTAGAGAGGCAACGAACAGAGTGAAGCGCGGCGGCGGAGGGAGGATCGTCCTGCTGACGACGTCGTTGGTGAAGGCGCTGCGGGCGGGGTACGCGACGTATACGGCATCGAAGGCGGCGGTGGAAGCGATGGTTAAGATCGTTGCGAAGGAGCTGAAGGGGACGGGAATAACGGCGAACTGCGTGGCGCCAGGGCCGATAGCGACGGAGATGTTCTATGAGGGGAAGTCGGAGGAGCTTGTGGAGAAAATAAAGAATGATATTCCGTTGGGGCGTTTAGGGGAACCGAATGACGTGGCGAATTTGGTTGGTTTCTTGGTTAGTGATGGTGGCGAGTGGGTCAACGGCCAAGTGATTCGTGTCAATGGTGGCTTTGTCTAG 810 0.5778 MATPIPEPVSYDSTRIKPLQDRVAIVTGSSRGIGREIAIHLASLGALVVVNYTSSSSQADSVVAQINSAADSPPRAVAVKADISNPDDVKSLFDSAERAFDSEVQILVNSAGILEGTYPTVANTDVETFDKIFAVNTRGAFLCCREATNRVKRGGGGRIVLLTTSLVKALRAGYATYTASKAAVEAMVKIVAKELKGTGITANCVAPGPIATEMFYEGKSEELVEKIKNDIPLGRLGEPNDVANLVGFLVSDGGEWVNGQVIRVNGGFV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02527 269 Pfam Enoyl-(Acyl carrier protein) reductase 28 268 - -
Aip06g02527 269 CDD THN_reductase-like_SDR_c 19 269 - -
Aip06g02527 269 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 13 269 - -
Aip06g02527 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 113 IPR002347 -
Aip06g02527 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 IPR002347 -
Aip06g02527 269 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 13 269 - -
Aip06g02527 269 Gene3D - 3 268 - -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 23 40 IPR002347 -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 102 113 IPR002347 -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 177 196 IPR002347 -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 198 215 IPR002347 -
Aip06g02527 269 PRINTS Glucose/ribitol dehydrogenase family signature 232 252 IPR002347 -
Aip06g02527 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 268 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02527 Aip-Chr6 112198855 112199946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02527 16 268 Acyl Lipid Metabolism Gene Families AT1G24360 32.283 1.30e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02527 K00059 - gmx:100809416 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02527 06 112198855 112199946 Aip06g02527 06 112198855 112199946 ECH