Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02525 ATGGCAATTGCACGCACTGGAGTCTACGTGGATGACTATTTGGAGTATGCTAGCACTTTGCCCGCTGAGCTTCAGAGGCTTCTCAATACTGTGCGAGAACTTGATGAACGATCCCAATCTATGATAAACCAGACTAGGCAGCAAACAAAGGTGTGTATGGGGATCTCATCACATGGCTCTAAGAAGGGTAACCATGTCAGTGGCCATCATTATAATAACAATCATCATGCAAATGAGGAAGACGAGGCTGCGATTGAGAAATTGCGAAAGGAAATCGAGGCCAATCAGGATAATGCATTGAACCTATGTACTGAGAAAGTTTTGTTGGCACGGCAAGCATATGACTTGATAGATAGTCATGTCAAACGTCTTGATGAGGATTTAAACAACTTTGCCGAAGATCTGAAGCAAGAGGGGAAAATACCACCGGATGAACCAGCAATTCTTCCCCCATTGCCTATAGTCCCTAAACCTGAAAAACGCAAGCCCTTATATGTAACACCACAGTCAAAGAGGCTTGATTACAGGGATAGAGACTGGGATCGGGAGCATGATAGAGACTTTGAGCTAATGCCTCCACCAGGTAGCCATAAGAAGGAGTATGTAACTCCTATGGAGATGGATACACCTATTGATCCAAATGAGCCAACATACTGTGTTTGTCATCAGGTGTCTTTTGGTGACATGATTGCTTGTGACAATGAAAATTGCCAAGGAGGAGAATGGTTCCACTATTCATGTGTCGGCTTAACTCAAGAGACAAGGTTCAAGGGTAAATGCAAGACGAAAGATTCAAAAGCGGGAAAAGACTTTTATACCCTCTCCCCGACTAAACTTCCAAAGTGTTATGAAGTCTTGGAGCTGATTTTCGAGCATGAATCTGCGAAAATATTTAAGGGAATAGAATTCAAGGGAGTAAATATTCATGGAACAACTATTACAAGAAGTTCAGTAATGGGAAAGAATCTCAGCCCCGTGATGCAGCAAGAGCTGGCAAATCTTGACAAAGATCCAGATAGCCGCAAATCTGCCATGAAAGCTTTGAAATCATATGTTAAGGATTTGGATTGCAAGGCCATTCCTGTGTTTCTTGCAAAAGTTTCTGAGACCAAAGAAACCGGCTCTTTGTCTGGTGAATTCACAATTTCACTCTATGAGGTTCTTGCTAGGGTTCATCAAGTCAAGATTGTCCCCATGATAGACAGCATCATGGTGTCCATAGTTCAGACCTTAGCTTCAAGTGCAGGGTCCTTCCCTCTTCACCAGGCTTGCTCGAAAGTGGTTCCGGCTATTGCCAGATATGGAATTGAACCCACAGCCCCTGAAGACAAAAAGAGACACATTATTCATTCCATTTGCAAGCCTCTTTGTGATTCCCTCTCTAGCTCCCAAGATAGTTTAACTTCCGGTGCTGCACTTTGCCTAAAGGCCCTGGTTGATTCAGATAATTGGCGATTCGCTTCGAGTGAAATGGTCAATAGGGTTTGCCAGAATGTTGCTGTGGCATTGGAGGGAAAGTCCACTCAAACCAATGCTCACATGGGTTTGGTTATGTCGCTGGTGAAGCGCAATGCTCTGGTTGTTGAAGCCTATGCAAGGCTGCTCATACAATCTGGACTAAGAATTCTGAATGCTGGCCCAGAGGAGCGTAATTCTCACAAGAGGCTCTCAGCCATTCAGATGGTGAATGTATTGATGAAGTGTTTGGACCCAAGGAGTGTATTCTCGGAGCTCGATTTGGTAATTGAAGAGATGGAGAAGTGCCAGTCTGATAAAATGGCTTTCGTGAAAGGTGCAGCATTTGAAGCCTTGCAAACTGCTAAGAGAATTGCAACTGACCGGAAGCCAAGATATGTAAAGAGTCCTGCTTCGGTGACAGGGTCGAATTTTGGTAATAGAGACTATATGGAGGGGGAAAATTCTCCTCAATCTATTTCACCAGAATCATGTACTATTGACTTTTTCAGTGGCTACGAATCTGGATCTGTTGCCGAGTCTGCTATTTCGACCGGGCAATATCGCTGGAACTCGGATTATGAGAGGAGGAGTGTGAATAGGAAGCTTTGGAGTTATGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTGTTCTCCAAAGTGGGGCAAGAGAATCCCTTGTTGGAGCAGTCTGTGAGCAATGAGTTTCCTCTTGGAGATGGAGAATTGTCTGAGGAATTTTCTGGTTTCATGTATCGAAATCCTGTGAATAGAATATCTAAAAGTACCAACACAAGTCCACTGAGATCGCGCTCGCAAACCACAGCTGACCTGATCAATATCTTTGAGACCCCAAGGAAGCTCATTCAATCCCTTCAAGATCCAAGTGATGTTTCTCCGGGTAGCTCTGAGAAACAGAACAGAAGGTACAGGAGTCTATCCTCAGGCAATATCGATTGGAGCCCGACATCTGAATTTGACGAAAATGGTTCATCAGATCATACAAACTGTGACTGTAAAGTGAATCAAAGCGACGACGAATTCAAGAGTGACTCTGAGTCAGTGTCATCAACTGATGATCTTTCTGGAGATGCCGGTATTCAGACACCTATCAATGTTGTTCCCGAAAATAAGAATATTGTGCAAACTGGCAGCACAGGGAAAGCACGTCACAAGATGAAACGTAAATTGTTCTGCGGCTTTTCATTCGTGCTCCTTGCAATGGCCACCCCTCTGATTTGGATCAGCAGTCAGCAGGATCAAGGCCATTACCTTGTCCCTACATAA 2748 0.4407 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDERSQSMINQTRQQTKVCMGISSHGSKKGNHVSGHHYNNNHHANEEDEAAIEKLRKEIEANQDNALNLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAILPPLPIVPKPEKRKPLYVTPQSKRLDYRDRDWDREHDRDFELMPPPGSHKKEYVTPMEMDTPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKCKTKDSKAGKDFYTLSPTKLPKCYEVLELIFEHESAKIFKGIEFKGVNIHGTTITRSSVMGKNLSPVMQQELANLDKDPDSRKSAMKALKSYVKDLDCKAIPVFLAKVSETKETGSLSGEFTISLYEVLARVHQVKIVPMIDSIMVSIVQTLASSAGSFPLHQACSKVVPAIARYGIEPTAPEDKKRHIIHSICKPLCDSLSSSQDSLTSGAALCLKALVDSDNWRFASSEMVNRVCQNVAVALEGKSTQTNAHMGLVMSLVKRNALVVEAYARLLIQSGLRILNAGPEERNSHKRLSAIQMVNVLMKCLDPRSVFSELDLVIEEMEKCQSDKMAFVKGAAFEALQTAKRIATDRKPRYVKSPASVTGSNFGNRDYMEGENSPQSISPESCTIDFFSGYESGSVAESAISTGQYRWNSDYERRSVNRKLWSYENGGVDVSLKDGLFSKVGQENPLLEQSVSNEFPLGDGELSEEFSGFMYRNPVNRISKSTNTSPLRSRSQTTADLINIFETPRKLIQSLQDPSDVSPGSSEKQNRRYRSLSSGNIDWSPTSEFDENGSSDHTNCDCKVNQSDDEFKSDSESVSSTDDLSGDAGIQTPINVVPENKNIVQTGSTGKARHKMKRKLFCGFSFVLLAMATPLIWISSQQDQGHYLVPT 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02525 915 MobiDBLite consensus disorder prediction 778 857 - -
Aip06g02525 915 CDD PHD_ING 218 261 - -
Aip06g02525 915 PANTHER PROTEIN SINE1 319 915 - -
Aip06g02525 915 SUPERFAMILY ARM repeat 331 611 IPR016024 -
Aip06g02525 915 SUPERFAMILY FYVE/PHD zinc finger 193 254 IPR011011 -
Aip06g02525 915 Coils Coil 24 44 - -
Aip06g02525 915 Gene3D - 5 129 - -
Aip06g02525 915 MobiDBLite consensus disorder prediction 818 841 - -
Aip06g02525 915 PANTHER GEMIN2 319 915 - -
Aip06g02525 915 Coils Coil 78 105 - -
Aip06g02525 915 SMART ING_2 9 131 IPR024610 -
Aip06g02525 915 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 266 IPR013083 -
Aip06g02525 915 MobiDBLite consensus disorder prediction 778 817 - -
Aip06g02525 915 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 131 IPR024610 -
Aip06g02525 915 CDD ING_plant 17 128 - -
Aip06g02525 915 Gene3D - 326 620 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02525 Aip-Chr6 112116360 112128888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02525 - - gmx:102659858 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02525 06 112116360 112128888 Aip06g02525 06 112116360 112128888 ECH
Aip06g02525 06 112116360 112128888 Aip10g03455 10 133066951 133069848 PCT