Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02497 ATGCAGAGGACTAAAACAAATTGGCTGCTTTGTTTCAATGTTGTGTGTATCTATGATGGTGCAGTTGGAAGAGAGATTATCGAGCTATGCCTCGATCGAGTTAGAAAATTGGCAGATAATTGCACCGGTTTGCAAGGATTCTTGGTTTTTAATGCTGTTGGTGGAGGCACTGGCTCTGGTCTTGGATCGTTGCTTTTGGAACGATTATCTGTGGATTATGGAAAGAAATCTAAACTTGGATTCACTATCTACCCTTCTCCTCAGGTATCTACTGCAGTTGTTGAACCTTACAACAGTGTCCTTTCCACTCACTCCCTTCTGGAGCACACTGATGTGGTTGTGCTTTTAGACAATGAAGCAATATATGACATCTGCAGAAGATCATTAGACATTGAAAGGCCAACTTACACCAACTTGAACCGTCTCATTTCTCAAATCATCTCATCCTTAACCACTTCCTTGAGATTCGACGGTGCGATCAATGTGGACGTTACTGAGTTCCAAACTAACCTTGTGCCGTATCCTCGAATCCATTTTATGCTCTCATCCTATGCACCTGTCATTTCGGCTTCTAAGGCATTCCATGAGCAGCTATCGGTTCCTGAGATCACCAGTGCTGTTTTTGAGCCGTCAAACATGATGGCTAAGTGTGATCCTAGACATGGCAAGTACATGGCTTGCTGCCTCATGTATCGCGGCGATGTTGTGCCAAAAGATGTAAATGCAGCTGTTTCAAATATCAAGACAAAGCGAACAATTCAGTTTGTTGACTGGTGTCCTACTGGTTTCAAGTGTGGAATCAACTACCAGCCTCCAACAGTTGTACCAGGAGGTGATCTTGCGAAGGTGCAGCGAGCAGTTTGTATGATAAGCAACAACACGGCTGTGGCCGAGGTTTTCTCTCGTATCGACTACAAATTTGATCTCATGTATGCTAAGCGTGCATTCGTCCACTGGTATGTTGGTGAAGGAATGGAAGAAGGTGAGTTCTCAGAAGCCAGGGAGGATCTTGCTGCACTCGAAAAGGACTACGAAGAAGTTGCAGCAGAAGAGAACGAAGACGAAGAAAGCGGCCAAGAAGGTTACTGA 1089 0.4454 MQRTKTNWLLCFNVVCIYDGAVGREIIELCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISASKAFHEQLSVPEITSAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSNIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAAEENEDEESGQEGY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02497 362 PANTHER TUBULIN 21 354 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 Coils Coil 330 357 - -
Aip06g02497 362 SUPERFAMILY Tubulin nucleotide-binding domain-like 21 157 IPR036525 -
Aip06g02497 362 PANTHER TUBULIN ALPHA-1 CHAIN 21 354 - -
Aip06g02497 362 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 54 60 IPR017975 GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 SUPERFAMILY Tubulin C-terminal domain-like 158 347 IPR008280 -
Aip06g02497 362 PRINTS Alpha-tubulin signature 186 201 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 334 350 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 73 84 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 233 254 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 259 272 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 272 291 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 126 138 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 297 313 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 32 40 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Alpha-tubulin signature 60 72 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 292 320 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 46 64 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 104 124 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 90 103 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 20 44 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 PRINTS Tubulin signature 65 86 IPR000217 GO:0005874|GO:0007017
Aip06g02497 362 Gene3D Tubulin/FtsZ, GTPase domain 7 180 IPR036525 -
Aip06g02497 362 Gene3D - 181 295 IPR037103 -
Aip06g02497 362 SMART Tubulin_4 2 158 IPR003008 GO:0005525
Aip06g02497 362 Pfam Tubulin C-terminal domain 175 304 IPR018316 -
Aip06g02497 362 Gene3D Helix hairpin bin 296 348 IPR023123 -
Aip06g02497 362 SMART Tubulin_C_4 160 305 IPR018316 -
Aip06g02497 362 CDD alpha_tubulin 22 347 - -
Aip06g02497 362 Pfam Tubulin/FtsZ family, GTPase domain 21 125 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02497 Aip-Chr6 111293795 111297548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02497 K07374 - gmx:100784487 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02497 06 111293795 111297548 Aip06g02497 06 111293795 111297548 ECH
Aip06g02497 06 111293795 111297548 Aip10g03448 10 133024406 133028708 PCT