Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02479 ATGGCTAAAATCCGCATCGCCATCATCTTATTGGGGCTCTGCCTAGTATGCAATTCGGCAGGTTTGGCAGAGGCAGAGTACATGAAGTACAAGGACCCCAAACTGTCAATCGATGCAAGGGTCGAGGATCTTATTAGCCGGATGACTCTTGAGGAGAAAATTGGCCAGATGTTGCAAGTCGAACGCAAGTATGTGTCTGCTGATGACATCAAGAAGTATTCTATTGGTATTGTCATGAGCGAGGCAGGGAGTATTCCAGGTCCATCTCGATTGGCTTCTGCGCAAACCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCTGTATCAAGCCGGCTTGGAATTCCAATGTTTTATGGCATTGATGCCGTTCATGGCCACAGCACTGTTTATAAAGCAACTTTTTTCCCTCACAATATTGGCCTTGGAGCTACCAGAGATCCTGAACTTATTAAGAGAATTGGAGCTGCCACTGCCCTTGAAGTTAGAGCAACAGGAATTCAATATGCCTATGCACCTTGTATAGCAGTATGTAGAGATCCAAGATGGGGTCGGTGTTACGAAAGCTACGGCGAAGATCCTGCACTAGTTCAGTCAATGACTGAAATAATACCAGGTTATTGTTTGGTTCTTACCTTTCGTCTGAAATTCTTATATACTGTGTTGGACAGTGAAAAGGTCATAGGTTCTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGTACAACACTGTCATAGATAGAGAGGGCTTGCTGAGAATTCACATGCCGGGTTATTTTGCTGCAATTAGCAAGGGAGTTGCAACGATTATGGTCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTAATCGTGAACTTATTACCGGATTCCTCAAGAATGCCCTCCATTTCAAGGGCGTGGTTATTTCAGATTTTGAGGGTATTGATAGGATCACCACTCCACCTCATGCAAATTTCACATATTCAGTTGAAGCTGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCTCAATTCTACAAAGAATTCGTAGATGATCTAACCAAATTGGTGACAAAGAAGTTCATTCCTATGAGTCGAATCGATGATGCAGCAAAGAGAATTTTGTGGGTTAAATTCATGATGGGCCTATTTGAGAACCCTTTTGCTGATTACAGTTTGGTTAGATATCTGGGAATACAGGAGCATAGAGAATTGGCTAGGGAAGCTGTGAGGAAATCACTGGTCCTTCTTAAAAATGGCGAATCTGTTGAGAAGCCTCTATTGCCTCTTCGTCGGAAGGCTTCGAAAATACTTGTAGCCGGAAGCCATGCAGATAATCTAGGATATCAGTGTGGCGGCTGGACTATTGAATGGCAAGGAATCAGTGGCAATGATATTCTCAAAGGGACTACAATTCTCAATGCTATAAGAAACACTGTTGATCCAGAGACCATAGTGACCTACAAGGAGAATCCTGATGCCGAATTTGTCAAGTCCAATGGATTTTCTTATGCCATAGTTGTAGTAGGAGAGCATCCCTATGCTGAAATGCATGGTGATAACAAGAACTTGACCATCCCGGACCCTGGCCCCGAGACCATAACAAATGTATGTGGAGCCATAAAATGTGTGGTGGTTGTTATTTCCGGCCGCCCTGTAGTTATTGAACCATATCTTCATATAATAGACGCTCTTGTGGCTGCTTGGCTTCCGGGAAGTGAAGGCCAGGGTGTAGCTGATGTCCTATATGGCGACTACGGTTTCACCGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAATTACCAATGAATAAATTTCATTTCTCTGAGATAACGTTAAGCAAAAGCAACTATAGATAG 1869 0.4329 MAKIRIAIILLGLCLVCNSAGLAEAEYMKYKDPKLSIDARVEDLISRMTLEEKIGQMLQVERKYVSADDIKKYSIGIVMSEAGSIPGPSRLASAQTWIDMVNEFQKGAVSSRLGIPMFYGIDAVHGHSTVYKATFFPHNIGLGATRDPELIKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYGEDPALVQSMTEIIPGYCLVLTFRLKFLYTVLDSEKVIGSAKHYVGDGGTINGIDEYNTVIDREGLLRIHMPGYFAAISKGVATIMVSYSSWNGVKMHANRELITGFLKNALHFKGVVISDFEGIDRITTPPHANFTYSVEAGVSAGIDMFMVPQFYKEFVDDLTKLVTKKFIPMSRIDDAAKRILWVKFMMGLFENPFADYSLVRYLGIQEHRELAREAVRKSLVLLKNGESVEKPLLPLRRKASKILVAGSHADNLGYQCGGWTIEWQGISGNDILKGTTILNAIRNTVDPETIVTYKENPDAEFVKSNGFSYAIVVVGEHPYAEMHGDNKNLTIPDPGPETITNVCGAIKCVVVVISGRPVVIEPYLHIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKTVDQLPMNKFHFSEITLSKSNYR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02479 622 Gene3D - 23 399 IPR036962 GO:0004553|GO:0005975
Aip06g02479 622 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 7 608 - -
Aip06g02479 622 Gene3D - 400 621 IPR036881 GO:0004553|GO:0005975
Aip06g02479 622 SUPERFAMILY (Trans)glycosidases 27 414 IPR017853 -
Aip06g02479 622 PRINTS Glycosyl hydrolase family 3 signature 182 198 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 PRINTS Glycosyl hydrolase family 3 signature 297 315 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 PRINTS Glycosyl hydrolase family 3 signature 136 155 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 PRINTS Glycosyl hydrolase family 3 signature 227 243 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 PRINTS Glycosyl hydrolase family 3 signature 112 128 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 415 609 IPR036881 GO:0004553|GO:0005975
Aip06g02479 622 Pfam Glycosyl hydrolase family 3 C-terminal domain 415 610 IPR002772 GO:0004553|GO:0005975
Aip06g02479 622 Pfam Glycosyl hydrolase family 3 N terminal domain 49 376 IPR001764 GO:0004553|GO:0005975
Aip06g02479 622 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 7 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02479 Aip-Chr6 110663176 110666681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02479 2 607 Glycoside Hydrolase AT5G20950 67.657 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02479 K05349 - gmx:100779642 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02479 06 110663176 110666681 Aip06g02479 06 110663176 110666681 ECH