Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02447 ATGCTCTGCTTGCCCGAATCATTCACTCTCCCTTATCCAACCCTAGCTACTCTTTTCGACCCACTGTCGCCTCTCCATCGAGCCACTGCCCCCAAGTCTCCAACTCCCCTGCTCTCTTCTTCCGCGAGCTCGCCCCATCCCCTACTCTTTGCATCTTTTTGCCGTCGGCTTCATCTTCTTGCCGTCGTCTGGTCGGCGTCGTCCATCAATCAAGGGTCTCAAACCGAAGGCCCCAAGCATCCCGAAGCTCACTCTCTCGGTCTCTCCCAAGAAGCACAGATTCACTCACTCTCGCGCCTCCATCTCACTCGCCGCAGTTCCGCACGGTCACTCGTCGATCCTCTCGCCGGCTACTCTGCCTCGTCCCCGAGCCGCCAGTGTCTGCGCCTCTTCCTTCTCCGTCTGTGTTTTCCCAGCCGCCTTGTCTCCGCCGTGCCTTGCCTGTCTCTGCCTCCGCTTCCACCTCGTGCCTCGTCTGCCTCTGCTTCCTCCGTCGTCATCGTGTTGGCTCCTCTGCAGGCTCTGCTCTGCTCCTCTTCGAAGCTCTGCTATCTCTCGCCGGCGGCCTGCTCTGCAACGGTCCCAAGTTGGAAAACCGTTCCTGACTCTGTTTCTGACTTTCTGCTTCTGCTGTGTAGTGTAGAAGGAGAAAAAGGAAAAAAAAAAATTCTATTCACTCTCTCATATCGAGTTGCAATGCCTCAAACAGAGGCTGAGAAATCGCGGCGAGAACGGAGGAAAGAATCCCGTTTGGCAAAGAATGCATCCAAACACCAATCATGGCTTCACCACCAGAAATCTCGAGCTATCAAAAGAAGTAAAGATGATTTGGATAGGAAAACTAAGACAAACTTGGAGCAACCAGTTAGTACTAGTTTGGAGGAAAAAGAGGGTTTAGGGTTTGATTCGGATTCTGAGAAACATGTGACAGCTGAAGAGAGTGTTGTATCAGTGGCAATTTGTGGCTCTGATACTAAGAAAATGAAGAAGTTGAAGAAGGGTTCTAAAGGAAGTTCCAGGAAGAAGAGTGGCAAAGAGTTTTTTGGGCTGGATGCTGATATAGCTGCGGAGAAGGATCTTGAGTTGGAAAGGAAGCTTTCCAAGAAGCTTAAGGTGAAGGAAGGGAAATTGAGGGGTTTGGATGATGGGCTGAACATATTGCTCGAAGGAATGTTGCCTGCTATGGATTTATTTGGAGAAGAGGATACTCATGGTGCTAGTGAATTGCCGAAGAAAAGGTTGAAGAGCTTGTTGAGTAAGAAGCATAAGGAGGAAATATTGCCAAATGAAGGGATGGAAGCAGAGACAATAGATGGAGTGTTTGAGCTCATGAGAACATCTGATCAAGATGGAGCATTAGGAGATGTTGCTGATTGTGGAACTGTGAGGAAGAAGCATAAGAAGAGAAAGTTGTTGAGACAAGAGCAAGAAGATAATGTGGTGGATGATGATTTGTGCATATCGAATACTGTAGAATCCGTGGCAATGGAGGTGGCATCAGAGAATGTTTCTGCTGAAGTTCCAGCAAAGAAAGAAAAGGGAAAATATATTGCACCTCACTTGAGAGCTCGTGCTGGAAATGAACCTGAAGAGCATACTCAGATACGAAGACGTATACGAGGACTTCTTAATAGGCTTTCTGAATCTAATGTTGAATCAATTACCGGAGAATTGTCAACAATCTTTCAGTCTGTTGCACGTAGTGTAGCTTCACACATTATGATTGAGGAGGCTTTGGCATCATGCTCAGGTGGGCCACGGGGCAATGAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCAGGGATGGCCTGTTTAGTTGGTGTTGACTTCAGTGCAAAGTTTATGGCATCCTTTGCCAAATGCTTTGAGGATGAGTACCTTAAAGAGGACAATCTCTCTCTGCGGAATCTTACACTTCTCTTATCCTATTTATGCATATTTGGGGTCTGTTCTAGTGATTTAATATATGACTTTCTAGTCATGTTGAGCAAGCGATTGACCGAGATAGATGTCTCTATCATATTGGCAGTCCTACAGTGTTGTGGAATGAAAATTAGGGCTGATGATCCGATTTCCATGAAAAATTTTATTGTTAGTGTTCAGAAGACGACAAATGACCTGAAGGCTTCCTCCAGAGATAATCATGAAAAGAGAAATAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAACAAGAAAAGACAAAAGGAGGACCCTGCACACCACACTCGGATTAAGAAGTGGTTGCAGAAGGACAGAGATATAATGCGGGTTCTTCTCGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACGGTGCTGGCGACGAAGTTGTGCGAGCATGACAAAAATCACAAGTTTACCCTGCAGTTTTGCATTTGGGACCACTTTAAGGAACTTGATTCAATGCAGCTTATGAGGTCAATGCACCTTGCCAAATTTGTGGCTGAAATGGTTTCCTCTTTCACCCTCTCCCTTGCAGTGTTGAAGACTGTGGAGCTCAGTGATCTCAACCTGTTATCCCCCAGAAGAGTTATGCATTTCCGCATGCTGTTTGAGGCCATCTTCGAGTACCCCGATAGCACCGTCTGGAATGTATTCACACGTGTGGCCGTGGCCCCTGAACTCGAGGGTCTTCGACAAGGCATTGAATTCTTCGGTAAAGAGTACATTGTCAAATCCAACAAAGATCTAAATCAGAAGTTTAATTCACAGTTCACACTACCCACAAACGCGCTTCTCCTTCAACTGTGGGGTCGCGCTTCTCCTTCAACTGTGGCGTCTTCTCCTTCGGCGCTTCTCCTTCAGTCTTCTCCTTTCTCGTTCGCGGTTGTCATTCTTTGGTTTCACTGTCTCCGTCTTGCCGATTTGCCGTCACAGGTGTGGGCTTTCCATTCGCCTTTGCTCGTGCTTCTTGCCACTGGTTACAGCTGCAAATTTTGTTTTTCCACCCAGGAGCACAACAAAGTTCGTGAAACTGAACCAGAACAAGCAGTAGCCCCTGTTCTAGTTCTTTCAGGTTAA 3048 0.4646 MLCLPESFTLPYPTLATLFDPLSPLHRATAPKSPTPLLSSSASSPHPLLFASFCRRLHLLAVVWSASSINQGSQTEGPKHPEAHSLGLSQEAQIHSLSRLHLTRRSSARSLVDPLAGYSASSPSRQCLRLFLLRLCFPSRLVSAVPCLSLPPLPPRASSASASSVVIVLAPLQALLCSSSKLCYLSPAACSATVPSWKTVPDSVSDFLLLLCSVEGEKGKKKILFTLSYRVAMPQTEAEKSRRERRKESRLAKNASKHQSWLHHQKSRAIKRSKDDLDRKTKTNLEQPVSTSLEEKEGLGFDSDSEKHVTAEESVVSVAICGSDTKKMKKLKKGSKGSSRKKSGKEFFGLDADIAAEKDLELERKLSKKLKVKEGKLRGLDDGLNILLEGMLPAMDLFGEEDTHGASELPKKRLKSLLSKKHKEEILPNEGMEAETIDGVFELMRTSDQDGALGDVADCGTVRKKHKKRKLLRQEQEDNVVDDDLCISNTVESVAMEVASENVSAEVPAKKEKGKYIAPHLRARAGNEPEEHTQIRRRIRGLLNRLSESNVESITGELSTIFQSVARSVASHIMIEEALASCSGGPRGNEQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYLKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEIDVSIILAVLQCCGMKIRADDPISMKNFIVSVQKTTNDLKASSRDNHEKRNSKRMEFMLETICDIKNNKKRQKEDPAHHTRIKKWLQKDRDIMRVLLECCLQEKVFNKYYTVLATKLCEHDKNHKFTLQFCIWDHFKELDSMQLMRSMHLAKFVAEMVSSFTLSLAVLKTVELSDLNLLSPRRVMHFRMLFEAIFEYPDSTVWNVFTRVAVAPELEGLRQGIEFFGKEYIVKSNKDLNQKFNSQFTLPTNALLLQLWGRASPSTVASSPSALLLQSSPFSFAVVILWFHCLRLADLPSQVWAFHSPLLVLLATGYSCKFCFSTQEHNKVRETEPEQAVAPVLVLSG 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02447 1015 Pfam MIF4G domain 537 738 IPR003890 GO:0003723|GO:0005515
Aip06g02447 1015 MobiDBLite consensus disorder prediction 236 254 - -
Aip06g02447 1015 Pfam MA3 domain 759 829 IPR003891 -
Aip06g02447 1015 Gene3D - 501 768 - -
Aip06g02447 1015 SMART if4_15 536 738 IPR003890 GO:0003723|GO:0005515
Aip06g02447 1015 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 757 914 - -
Aip06g02447 1015 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 233 757 - -
Aip06g02447 1015 MobiDBLite consensus disorder prediction 236 305 - -
Aip06g02447 1015 SUPERFAMILY ARM repeat 529 738 IPR016024 -
Aip06g02447 1015 ProSiteProfiles MI domain profile. 714 842 IPR003891 -
Aip06g02447 1015 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 757 914 - -
Aip06g02447 1015 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 233 757 - -
Aip06g02447 1015 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02447 Aip-Chr6 109763431 109775102 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02447 K17583 - gmx:100778579 570.466