Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02419 ATGCAACGTCATGCACACCATGCCGGTGGCTTTCAACCTCCAACCACAAATCAAATGTCGCTACACAGTGAAGCCACATTCAGGAATCATATCTCCATTATCCACACTCACCGTGGNNCACTTTCCACTTTCCTCCTCCACAGTTGTGTCGTCCCTGGCGCAGCCATCAATGAACCTTCCTCCATGGTTGATTGTGTCCCAAGCGAGTGGTTCTCGGCGAAAAAGAAGCAAGTCTTCGTGGATACCGGCATCAAGATCGTGTTTCTTGGATCCACAATTCTGGTTAAGCTCATTGGAGATGATCATGGTTCCATGGATGACATAAGGGAAGTTCTAGAACGGAGCGATCCCTCGTGGAAAGCGGTTGATTCGATCGACTCGAACGGCGAAACGTTGCTCCATTTGGCGATTTCGCGGAAGAGACCGGATGTTGTTCAGTTGCTGCTAGAATTTGAGGCTAACTTAGAGGCGCGAGACGGTTCTGGATCAACGCCACTAGAGGCTGCAGCATCTTCAGGTGCAGCCTTAATAGCTGAGCTTCTATTAGCTCACAAGGCCAACATAGAAAGACAAGAAACTTCGACATTTGGACCCATCCACGTCGCTGCGAAACAAGGACACTGCGAAGTTTTGAGGCTCTTGTTACTCAAAGGTGCGAGAGTGGACTCGCTCACAAAAGATGGCAACACAGCGTTACACCTTGCGGTTGAAGAAAATAAAATAGAATGCGTTAAGCTCTTACTAGCAAACGGTGCCAGAACCGACATTCGCAACGCCGGCGAAGGCGACACCGTCTTACACATAGCAGCATCCACCGGGGATCATAACATGGTCGAACTCTTGCTACGAAACGGTGTGAACAAGTATGTTAGAAATGATTCATCAAAAGCTGCATATGATGTTGCAGCAGAGAAAGGACACTCTGGAATCTTCGATGCGCTGAGGCTCGGCGACGATTTGTGCATTGCTGCAAGGAAAGGAGAAGTGAGATCAATACAAAAGTTGCTTGAGAATGGTGCGTTTGTCAATGGTAGGGACCAGAATGGGTGGACTCCATTGCACAGGGCTTGTTTCAAAGGGAGGATCGACGCAGTGCACGTGCTTTTGGAGAAAGGGATTGATTTGAATGCAGAGGATGAAGAAGGGTACACTGCTTTGCACTGTGCTGTTGAATGTGGAAATGCTGATGTGGCAGAGGTTTTGGTGAAGAAAGGTGCTGATGTTGAAGCCAGGAGTAAGAAGGGTATCACTGCTTTGCAGGTGGCCAAGGCGCTTCGCTACGTTGGGATCACAAGAATTCTTGTCAATGGTGGTGCTAGTACTTTGGATCATCAAATGGTGGTGCCAGATTCCGGTGCAGTGGTTCCATTTAAGAGTAAAATTAATGCTAAGTGGAAAATGATGAAGGACGGTAGCGGTGGCTTTGCTCGTGCTTCAACTACTCCGGCTATACCTATGCTTGGTTCATGA 1470 0.4816 MQRHAHHAGGFQPPTTNQMSLHSEATFRNHISIIHTHRXXLSTFLLHSCVVPGAAINEPSSMVDCVPSEWFSAKKKQVFVDTGIKIVFLGSTILVKLIGDDHGSMDDIREVLERSDPSWKAVDSIDSNGETLLHLAISRKRPDVVQLLLEFEANLEARDGSGSTPLEAAASSGAALIAELLLAHKANIERQETSTFGPIHVAAKQGHCEVLRLLLLKGARVDSLTKDGNTALHLAVEENKIECVKLLLANGARTDIRNAGEGDTVLHIAASTGDHNMVELLLRNGVNKYVRNDSSKAAYDVAAEKGHSGIFDALRLGDDLCIAARKGEVRSIQKLLENGAFVNGRDQNGWTPLHRACFKGRIDAVHVLLEKGIDLNAEDEEGYTALHCAVECGNADVAEVLVKKGADVEARSKKGITALQVAKALRYVGITRILVNGGASTLDHQMVVPDSGAVVPFKSKINAKWKMMKDGSGGFARASTTPAIPMLGS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 381 413 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 348 380 IPR002110 GO:0005515
Aip06g02419 489 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 33 469 - -
Aip06g02419 489 Pfam Ankyrin repeats (many copies) 260 302 IPR002110 GO:0005515
Aip06g02419 489 Gene3D - 319 382 IPR036770 -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 194 222 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 194 226 IPR002110 GO:0005515
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 227 259 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 261 290 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 348 377 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 381 410 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 414 444 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 315 344 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 128 157 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 161 190 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 194 223 IPR002110 GO:0005515
Aip06g02419 489 SMART ANK_2a 227 256 IPR002110 GO:0005515
Aip06g02419 489 Gene3D - 383 447 IPR036770 -
Aip06g02419 489 Gene3D - 99 316 IPR036770 -
Aip06g02419 489 PRINTS Ankyrin repeat signature 349 364 IPR002110 GO:0005515
Aip06g02419 489 PRINTS Ankyrin repeat signature 397 411 IPR002110 GO:0005515
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 227 258 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 381 413 IPR002110 GO:0005515
Aip06g02419 489 SUPERFAMILY Ankyrin repeat 122 441 IPR036770 -
Aip06g02419 489 Pfam Ankyrin repeats (3 copies) 320 411 IPR002110 GO:0005515
Aip06g02419 489 Pfam Ankyrin repeats (3 copies) 116 191 IPR002110 GO:0005515
Aip06g02419 489 Pfam Ankyrin repeats (3 copies) 198 257 IPR002110 GO:0005515
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 128 159 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 161 189 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 348 380 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 128 160 IPR002110 GO:0005515
Aip06g02419 489 ProSiteProfiles Ankyrin repeat profile. 161 193 IPR002110 GO:0005515
Aip06g02419 489 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 33 469 - -
Aip06g02419 489 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02419 Aip-Chr6 108982654 108985222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02419 262 442 Miscellaneous Gene Families AT2G31820 33.495 1.95e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02419 - - ahf:112754810 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02419 06 108982654 108985222 Aip06g02419 06 108982654 108985222 ECH