Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02359 ATGCTCCGCCACGTCATACTCTCCAGATCCTCCTTCCACCTCCGGCGCTTCTCCCAGTCATCCGCCGCGGCGGTTCTCCACCATGAGTCACCGGAGGTGCAGCCGCTGACATACCTAGAAGGCTTTCCGAGACCGGACTCGAAATACGACGAGACGATACTCGCAATTCCTCGCGCGATTTCGGGGAAGAACATATCGGCGAAGGAACGGAAGGTTGGGCGCGTGCCTAGCATTGTGTTCGAGCAGGAGGACGGTCAGCATGGCGGCAACAAGCGCCTCATTTCCGTACGGACTAACCAGATCAGGAAGCTCGTCAACCAGCTTGGCCGCTCATTCTTTCTCTCCCGCCTCTTCGACCTCGAAGTCCGGTCGGAGTTCGAGAGCGGGGACGTTGTTGAGAAGGTTCGGGTTTTGCCCCGCAAGATTCATTTGCAGGCAGGCACAGATGCACCACTAAATGTCACTTTTCTAAGGGCTCCATCAAATGCTCTGTTGAAAGTTGAGGTTCCTCTTGTATTCCGAGGAGAAGATATATCCCCTGGACTGAAGAAAGGTGCTGCTTTGAATACCATCAAAAGGACCGTTAAGTTCCTATGTCCTGCTGACATTATCCCCCCATATATTGATGTGGATTTAAGCGAGTTGGATGTTGGCCAGAAGTTGGTTATGGGAGATCTTATTGTTCACCCTGCGCTAAAACTTATTCAGTCAAAAGATGAACCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAACTACAAAAGAAAAAGTAA 774 0.5078 MLRHVILSRSSFHLRRFSQSSAAAVLHHESPEVQPLTYLEGFPRPDSKYDETILAIPRAISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNQLGRSFFLSRLFDLEVRSEFESGDVVEKVRVLPRKIHLQAGTDAPLNVTFLRAPSNALLKVEVPLVFRGEDISPGLKKGAALNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLIVHPALKLIQSKDEPVCKIMGQRVSELQKKK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02359 257 Pfam Ribosomal L25p family 55 156 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Aip06g02359 257 Gene3D Ribosomal protein L25, beta domain 162 254 IPR037121 -
Aip06g02359 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 31 256 - -
Aip06g02359 257 Pfam Ribosomal protein TL5, C-terminal domain 165 247 IPR020057 -
Aip06g02359 257 PANTHER BNAA01G13300D PROTEIN 31 256 - -
Aip06g02359 257 Gene3D Ribosomal Protein L25; Chain P 52 159 IPR020056 -
Aip06g02359 257 SUPERFAMILY Ribosomal protein L25-like 58 247 IPR011035 GO:0006412
Aip06g02359 257 CDD Ribosomal_L25_TL5_CTC 52 158 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02359 Aip-Chr6 107226710 107230308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02359 K02897 - vvi:100242725 402.905