Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02353 ATGTTGATACGGATAAGGCACCGCAGTAAAAAGGTTGATCAGGGTTCAGAATTAGGCCGATCATCATCATCAACAACTCTTAATCTTGTTTTTGAGAATGGTGGTGTTGGTGTTGGTGTTGGAGGAAGGTGGTCAAGTGGATTTGGGAGCTTGATTAGAAGGAAGCAAGTTGATTCAGTTCAATTCAAGGCACATGGTGGTCATCATCATCAATTGGCTAGGAAGTTATCTGCTGTGGACCTCGTTGCTATTGGGGTTGGATCTACAATAGGTGCTGGTGTATATATTCTCATAGGAACAGTTGCTAGAGAGCATGCAGGACCAGCACTTGTGATATCACTTCTCATTGCAGGAATAGCTGCTGCACTATCGGCTTTTTGTTATGCGGAGCTTGCATGTCGATGCCCCTCCGCAGGGAGTGCTTATCATTATGCATACATATGCCTTGGAGAAGGAGTTGCTTGGTTGGTTGGTTGGGGCTTGATTCTTGAATATACTATCGGTGGTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTATTTTTCGGAGGGTGGGACAATCTACCTTTCTTTTTGACACGGCAAACATTACCAGGTCTTGGTGTGAGTTCAATGGCACAATCAATAGTGACAACAATAAATGTCTGTGCAATGCTTTTCGTCATTATAGTTGGTGGATATCTGGGTTTCGAATCTGGATGGATTGGATATGAGCTACCTAGCGGGTATTTTCCTTATGGAGTGAATGGGGTGTTTGCTGGGTCTGCAATAGTTTTCTTTTCATACATTGGGTTTGATGCAGTCTCCAGCACAGCTGAGGAGGTTAAAAACCCTCAACGAGATTTGCCCCTTGGCATATCAATAGCGTTATTTATATGCTGCATTCTTTATATGCTTGTATCAGCAGTTATTGTTGGCTTGGTACCATATTATAGGTTGGACCCTGATACACCGATCTCGTCTGCATTTTCTAGCTATGGCATGAAATGGGCCGTCTATGTAATAACAACTGGAGCTGTCACTGCTCTTTTTTCCAGTTTGATGGGTTCACTTCTTCCTCAGCCACGAACTTTTATGGCGATGGCTAGGGATGGTTTGTTGCCCTCATTCTTCTCAGACATCAATAAACACACGCAAGTTCCTTTGAAAAGCACTATTGTCACTGGTGTCCTTGCAGCCACTCTTGCATTCTTTATGGATGTTTCCCAGTTGGCAGGGATGGTTAGTGTGGGAACATTGCTTGCATTTACCACTGTTGCAGTCTCGGTTTTGATCATCAGATATGTTCCACCTAATGAGATACCTATCCCATCCTCGCTTCAAAAATCTATTGATCGGCATTCTTGTGGTGATGATGAAGATAGGGCAAGTCCTATAGATACTGCTAGTTATTGTGATAATCACCTATATGGCAAGTCAGAGGCTCTGCTTGGACAACCTTTAATTATAAAAGAAATCAAAGAAGAACAAAAGGAGAAAAGTAGGCGGAAACTTGCTGCATGGACTATTGCTCTTCTATGCCTAGGAATTCTCATAGTTGCCTTTGCTGCTTCAGCCAACAGGTGCCCCAGCATTTTGCGATTCACATTGTGCGGAGTGGGTGGAGTTCTTATTTTGTGCAGTGTTATTGTCCTTACCTGCATAGGACAAGATGATGCAAGGCACAGCTTCGGACACACAGGAGGTTTTGTTTGCCCATTTGTTCCATTCTTACCTGCTGCCTGCATTCTTATAAACACCTACCTCCTAATTGATCTTGGAGTTGCCACTTGGCTGCGAGTGTCCGTGTGGTTGCTGATAGGAGTGTTTATATACTTATTCTATGGCTGCACCCACAGCTCGCTGTTAAATGCGATCTATGTTCCCTCAGCATGTGCTAATGAAATCCTTGGAATTCGAGAAGAACATCTAGCCTAG 1923 0.4379 MLIRIRHRSKKVDQGSELGRSSSSTTLNLVFENGGVGVGVGGRWSSGFGSLIRRKQVDSVQFKAHGGHHHQLARKLSAVDLVAIGVGSTIGAGVYILIGTVAREHAGPALVISLLIAGIAAALSAFCYAELACRCPSAGSAYHYAYICLGEGVAWLVGWGLILEYTIGGSAVARGITPNLALFFGGWDNLPFFLTRQTLPGLGVSSMAQSIVTTINVCAMLFVIIVGGYLGFESGWIGYELPSGYFPYGVNGVFAGSAIVFFSYIGFDAVSSTAEEVKNPQRDLPLGISIALFICCILYMLVSAVIVGLVPYYRLDPDTPISSAFSSYGMKWAVYVITTGAVTALFSSLMGSLLPQPRTFMAMARDGLLPSFFSDINKHTQVPLKSTIVTGVLAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPNEIPIPSSLQKSIDRHSCGDDEDRASPIDTASYCDNHLYGKSEALLGQPLIIKEIKEEQKEKSRRKLAAWTIALLCLGILIVAFAASANRCPSILRFTLCGVGGVLILCSVIVLTCIGQDDARHSFGHTGGFVCPFVPFLPAACILINTYLLIDLGVATWLRVSVWLLIGVFIYLFYGCTHSSLLNAIYVPSACANEILGIREEHLA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02353 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Aip06g02353 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 45 632 - -
Aip06g02353 640 Pfam Amino acid permease 76 435 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aip06g02353 640 Gene3D Amino acid/polyamine transporter I 71 443 - -
Aip06g02353 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 45 632 - -
Aip06g02353 640 PIRSF AA_transporter 492 619 - -
Aip06g02353 640 PIRSF AA_transporter 64 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02353 Aip-Chr6 107045768 107051651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02353 48 640 Organic Solute Cotransporters AT3G03720 63.371 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02353 K13863 - gmx:100810218 934.095