Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02352 ATGGGGTCGTTCAAATTTTTTACCAGAAGAAAGCAAGTTGATTCTGTAGAAGTTGAAACCAAGGGTCTCCTTGCCAAGGAGTTAACTGTTCCTCATCTAATTGCAATTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTTGTTGGAACGGTTGCAAGAGAGGAAGCAGGACCAGCTTTGACAATTTCATTTCTGTTGGCGGGAATAGCAGCTGCTCTTTCAGCATTTTGTTATGCAGAACTTGCAAGTCGCTGCCCTTCTGCTGGGAGTGCATATCACTATTCATACATATGCCTTGGAGAAGGTGTTGCTTGGCTAATAGGCTGGGCATTAATACTGGAATATACAATTGGCAGCGCTACTGTTGCACGTGGCATAACCCCTAATTTGGCTGCGCTTATTGGAGGAGCAGACAAGTTGCCCATCTTTTTATCACGGCAGCATATTCCTGGAATAGATATTATTGTGGACCCATGTGCAGCAATTCTAGTATTCATTATAACCGCACTCTTGTGTATTGGGATTAAGGAGATTGCAGTAGTGCAAGGCACAATTACATCAATCAACGTATGCGCTTTGCTTTTTGTCGTAACAGCCGGAAGTTACTTGGGTTTTAAGTTTGGATGGGTTGGATATGATCTTCATAATGGGTATTTTCCTTTTGGGGTTGATGGAATGCTTGCTGGTTCTGCAACAGTCTTTTTTGCATATATAGGTTTTGATGCAATTGCTAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAAACTTACCACTTGGTATCGGTGGAGCCCTGTTTCTATGTTGTGGACTTTACATGATGATTTCCATTGTTGTTGTTGGATTAGTACCTTATTATGCAATTGATCCAGATACCCCAATTTCATCTGCATTTGCCAAACATGGCATGCACTGGGCAGCATACATTATAAATGCTGGAGCTTTTACAGCTCTTTGCTCAGCATTGATGGGTGGTATACTTCCTCAGCCACGAATCTTGATGGCCATGGCAAGGGATGGGTTACTGCCACCATTTTTTTCTGACATAAATAAGCATACTCAGATTCCTGTGAAGAGCACAATAGTTACTGGCCTTGGTGCTGCAATCCTAGCATTTTTTATGGAAGTTTCTGAACTAGCAGGGATGGCAAATATTTGTGTACTGTGCTGCCAAATTATGACCATATATAATTACTTTATTGTAATTTTTGAACTTTTATTTATTTATTTATTTTTATGTGTAGATGTAAATAACGAAAATAGGCGCAGAGTTGCTGGACGCATGATAGCACTTACATGCTTAGGGGCATTTGTCCTCACATATTCATCTTCTAATTTATCTCTTCATAGTTTTGTTCGCTTCACATTGTGTGGAGTTGGAGGCATTACTCTTTTATCTACTCTTGCCTTTCTAAGCAGTATGGAGCAAGATGATGCAAGTCAAAATTTTGGGCATTCTGGAGGTTTTGTCTGCCCATTTGTGCCACTATTACCCATAGTTAGCATTCTCATCAATTCATATTTACTAGTTAATCTTAGCATGGGGACGTGGTTGCGCGTTTCTGTATGGCTAGCAGGAGGAGTGCTAGTTTATGCATTTTATGGCAGAACTCATAGCTCTTTGAAAGATGTCATTTATGTGCCAGCAATTCAAGTCGACGAAATTTATCGAGCTTCCAAAACTTGTCTTGTTTAA 1701 0.4051 MGSFKFFTRRKQVDSVEVETKGLLAKELTVPHLIAIGVGSTIGAGVYVLVGTVAREEAGPALTISFLLAGIAAALSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWALILEYTIGSATVARGITPNLAALIGGADKLPIFLSRQHIPGIDIIVDPCAAILVFIITALLCIGIKEIAVVQGTITSINVCALLFVVTAGSYLGFKFGWVGYDLHNGYFPFGVDGMLAGSATVFFAYIGFDAIASTAEEVKNPQRNLPLGIGGALFLCCGLYMMISIVVVGLVPYYAIDPDTPISSAFAKHGMHWAAYIINAGAFTALCSALMGGILPQPRILMAMARDGLLPPFFSDINKHTQIPVKSTIVTGLGAAILAFFMEVSELAGMANICVLCCQIMTIYNYFIVIFELLFIYLFLCVDVNNENRRRVAGRMIALTCLGAFVLTYSSSNLSLHSFVRFTLCGVGGITLLSTLAFLSSMEQDDASQNFGHSGGFVCPFVPLLPIVSILINSYLLVNLSMGTWLRVSVWLAGGVLVYAFYGRTHSSLKDVIYVPAIQVDEIYRASKTCLV 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02352 566 Gene3D Amino acid/polyamine transporter I 24 422 - -
Aip06g02352 566 PANTHER PROTEIN, PUTATIVE-RELATED 414 557 - -
Aip06g02352 566 PANTHER PROTEIN, PUTATIVE-RELATED 2 402 - -
Aip06g02352 566 PIRSF AA_transporter 3 550 - -
Aip06g02352 566 Pfam Amino acid permease 32 444 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aip06g02352 566 Pfam C-terminus of AA_permease 491 541 IPR029485 -
Aip06g02352 566 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 414 557 - -
Aip06g02352 566 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 2 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02352 Aip-Chr6 107024559 107030243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02352 1 565 Organic Solute Cotransporters AT5G36940 61.020 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02352 K13863 - gmx:100820395 807.749