Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02339 ATGGCTTCTTGCGCAGGCACAAGATTTGGAAACACAACAAAAATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCTCGGAATCTGGCGGCCAGCATTTCCACCCTATGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAATAATCGGTTTCATGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCCCTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATGGGCACAGCAACTAGTCTTATAGTGGGATTAGTTTCCTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGCCAGACCCAGATTCGAATATGCGACGAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCAGAGTGTTGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTGGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAATCCCATGGATACTTATGAGGCGCTTCGTGACAGTATCAATCGTTCTGTTGGATGTATCGCCATTGGCTCAATCCTTCTCCCAGTCTTCACTCTCTTCCGCGGTTTTGGACGCTCGATGAGTCTACTTGGAGGAGAAGATGAGATCCTGTTTTGCTGTGTTAGTTCTTATATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAACCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTGGTGATATTTGGGAAATATTCACTAGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGTGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCGGAGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAAGCTCTGCAACTATTCTGA 1290 0.4481 MASCAGTRFGNTTKMSLRIIFQILFYLHLLLTAATVIFITVYGLTSESGGQHFHPMKWYPPVLASTACGGIIGFMWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYMGTATSLIVGLVSFCSALAQSLYGCWARPRFEYATNILSVSTAFPPAKTRVLVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTYEALRDSINRSVGCIAIGSILLPVFTLFRGFGRSMSLLGGEDEILFCCVSSYMGMVNVLPKFGNRWSFVHIGVYNKEFVDASGDIWEIFTRARMLPLIDSDLTGALCFLSGVAVGAFCSMVCGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPENDQFDSTIPARLEQIQRSQALQLF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02339 429 PANTHER F20H23.27 PROTEIN-RELATED 14 424 - -
Aip06g02339 429 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 14 424 IPR007603 GO:0022857|GO:0055085
Aip06g02339 429 Pfam Plasma-membrane choline transporter 121 405 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02339 Aip-Chr6 106731372 106732760 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02339 - - aip:107648347 842.032