Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02290 ATGACAATGGCGCTATCATCATCTTCATGCTTCTCTTCTTCCTATTCACCGCTCGCTCCTCCTCCTTCACTCCCTCGCCACCCTCTCATTAGCCTCAATTTCAAACCCAACTGTCGTGCCCGTGGCGGTTCTTCTCATCCCAAACTCAAAGCCTCCGTGGCTGCGCCGCCACTCTTCTCCGGCGCCACCAGACATGGCCTCGAAACTGTCAACATTGCTGAAGACGTCACCCAGTTGATTGGAAATACTCCAATGGTGTACCTCAACAAGGTTACAGAAGGATGTGTGGCAAACGTTGCTGCAAAACTTGAGTCTATGGAACTCTGCAGAAGTGTCAAGGATAGAATTGGCTTTAGTATGTTGTCTGATGCAGAAGAGTTTGGAGATATTTCTCCGGGGAAGACTGTTTTAGTTGAACCAACAACTGGAAACACAGGACTTGGCATCGCTTTTGTTGCAGCAACAAAAGGGTACAAACTTATAGTAACCATGCCTGCTTCCGTAAATCTTGAAAGGAGAATCCTTTTGCGTGCATTTGGGGCAGAGATTGTTTTGACTGATGCAGAAAAGGGATTGAAAGGGGCAGTTGAAAAAGCTGAAGAAATTGTTCAAAGTACACCCAATGCTTACATGTTTAGACAGTTTGATAACATGAATAATGCAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCATTGGTAATATTGATGTATTGGTTGCCGGTATTGGAACTGGTGGCACTGTTACCGGCACTGGACGTTACCTGAAAATGATGAACACCAACATAAAGGTGGTTGGTGTGGAACCTGCTGACAGAAGTATAATCTCAGGAGACAATCCAGGTTTCATGCCAAACATTTTGGATATCAAACTGCTCGACGAAGTTATCAAGGTTACAAATGTTGAAGCTATTGAAATGGCTAGGAGATTAGCGTTGGAAGAAGGTTTGCTGGTCGGAATTTCTTCAGGAGCTGCAGCTGCAGCTGCCATAAGTTTGGCAAGACGGCCAGAGAATTCTGGGAAACTTATCGTGGTCATTTTCCCTAGTTTTGGTGAGAGATATATTTCAAGTCCTCTCTTCCATTCTATCTATGAAGAAGTTCAGAAAATGTAA 1128 0.445 MTMALSSSSCFSSSYSPLAPPPSLPRHPLISLNFKPNCRARGGSSHPKLKASVAAPPLFSGATRHGLETVNIAEDVTQLIGNTPMVYLNKVTEGCVANVAAKLESMELCRSVKDRIGFSMLSDAEEFGDISPGKTVLVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNLERRILLRAFGAEIVLTDAEKGLKGAVEKAEEIVQSTPNAYMFRQFDNMNNAKIHFETTGPEIWEDTIGNIDVLVAGIGTGGTVTGTGRYLKMMNTNIKVVGVEPADRSIISGDNPGFMPNILDIKLLDEVIKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIVVIFPSFGERYISSPLFHSIYEEVQKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02290 375 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g02290 375 TIGRFAM cysK: cysteine synthase A 77 365 IPR005859 GO:0004124|GO:0006535
Aip06g02290 375 TIGRFAM cysKM: cysteine synthase 77 365 IPR005856 GO:0004124|GO:0006535
Aip06g02290 375 Pfam Pyridoxal-phosphate dependent enzyme 76 353 IPR001926 -
Aip06g02290 375 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 51 375 - -
Aip06g02290 375 PANTHER CYSTATHIONINE BETA-SYNTHASE 51 375 - -
Aip06g02290 375 Gene3D - 114 216 IPR036052 -
Aip06g02290 375 CDD CBS_like 81 361 - -
Aip06g02290 375 MobiDBLite consensus disorder prediction 1 17 - -
Aip06g02290 375 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 72 369 IPR036052 -
Aip06g02290 375 Gene3D - 78 361 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02290 Aip-Chr6 104338053 104343172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02290 68 375 Miscellaneous Gene Families AT3G03630 78.896 2.57e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02290 K22846 - gmx:100816974 558.91