Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02285 ATGGAATCGAGCATTCTAGAATCCATCGGCGTGGAGATAATCGGAGTCATGTCACCAGTCTCCATCTGCATGTTTCTCGTCGTCCTCCTCGTCTACTCCCTCTCCTCCTCCTCCTCCTCCCCTTCCTCAGCCGTCTCCGACATCCGCACCGCCGCTAACCTCGTCTACGCCGAGAACCCCTCCGACACCGCCGCACAGAAGCTCGAGGGAGCACTCCTCAACGCCCTCGTATTCGTCATCCTTATCGCCATCGTCACCTTCCTCCTCCTCCTCCTGTACTACTACAACTGCACCTCCTTCCTCAAACACTACACGCGCTTCAGCGCCTTCTTCGTCCTCGGCTCCATGGGCGGATCCATCTTCCTCTCACTCATCCAGCGATTCTCGATCCCCGTCGATTCCGTCACGTGCTTTATCCTTCTCTTCAATTTCACCGTCGTCGGGGTTCTCTCCGTTTTTGGCACCGGGATTCCGATAATCGTTCGGCAGTCGTACATGGTCTGTTTGGGTATCAGTGTTGCTGCGTGGCTGACCAAGCTGCCCGAGTGGACCACCTGGGTTCTTCTGGTGGCTCTGGCGGCTTATGATCTTGTGGCGGTTTTGGCACCTGGTGGACCGTTGAAGATGTTGGTTGAGTTAGCATCCAGCCGGAATGAGGAGCTTCCTGCTTTGATTTATGAGGCCCGGCCCACCACAGTGGCACGGGCCGGGTCTCGCGGAGGGACCAGTTTGGGGCTTTTGGTGACTGGGGTTACAGCAGGGGAGCCGTCTTCAGCGCCGTCATCATCGTCGTCATCGGCAATTGAGCTTCAAGCGGTGTCTAGGGACAACAAAGATAGGAATGTGAATGATAATTTGAATGAGAATAGGGATTATGGTGGGAATGAGTACTCTGTTGTGGCAATGGGTGGTTTTGGGGGTGAGAGAAGTCAGGGTGGGAGGAATGATGAAGAGGAGAGATCGCCATTGGTTGGCAATGGTGGCGGAGAGGGTGGTATTGTTGATGAGGAAAGGCATGAAGGGAATGAGAGCAGAGGTGGTGATGTGGAGATTGCTGAGAGGGGCATTAAGCTTGGCCTTGGAGACTTTGTTTTCTACAGTGTTCTTGTTGGTAGAGCTGCAATGTATGATCTCATGACTGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGCTGCACTCTTATTCTGCTGTCGGTGTGCCGCCAAGCTCTGCCGGCGCTCCCAATTTCGATCACCTTGGGTGTTCTTTTCTATTTCTTGACCAGATTGCTGATGGAACCCTTCATTGTTGGGACTGCCACAAATTTGATGATGTTTTAA 1326 0.5302 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSSSSSPSSAVSDIRTAANLVYAENPSDTAAQKLEGALLNALVFVILIAIVTFLLLLLYYYNCTSFLKHYTRFSAFFVLGSMGGSIFLSLIQRFSIPVDSVTCFILLFNFTVVGVLSVFGTGIPIIVRQSYMVCLGISVAAWLTKLPEWTTWVLLVALAAYDLVAVLAPGGPLKMLVELASSRNEELPALIYEARPTTVARAGSRGGTSLGLLVTGVTAGEPSSAPSSSSSSAIELQAVSRDNKDRNVNDNLNENRDYGGNEYSVVAMGGFGGERSQGGRNDEEERSPLVGNGGGEGGIVDEERHEGNESRGGDVEIAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISITLGVLFYFLTRLLMEPFIVGTATNLMMF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02285 441 MobiDBLite consensus disorder prediction 254 272 - -
Aip06g02285 441 MobiDBLite consensus disorder prediction 332 346 - -
Aip06g02285 441 PANTHER PRESENILIN 1 441 - -
Aip06g02285 441 PANTHER PRESENILIN 1 441 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aip06g02285 441 SMART psh_8 69 427 IPR006639 GO:0004190|GO:0016021
Aip06g02285 441 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aip06g02285 441 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aip06g02285 441 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aip06g02285 441 Pfam Presenilin 10 431 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aip06g02285 441 Gene3D Presenilin 334 432 IPR042524 -
Aip06g02285 441 MobiDBLite consensus disorder prediction 305 346 - -
Aip06g02285 441 MobiDBLite consensus disorder prediction 253 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02285 Aip-Chr6 104211092 104212903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02285 1 441 Miscellaneous Gene Families AT1G08700 61.720 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02285 K04505 - gmx:100819461 494.582