Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02235 ATGACTTCACTTTTTAAAATCACCTACATCTTTTTTCTACTTTCTTTGCTAGCATTGTGTTTTCTATCTAATGCCAATGCTAGAGTTAATCATACATCAACGTTAGTTGTTGATGGATCCAAGGGTTCTGGAAGACAAATTCCAGATACATTCTTTGGAGCATTCTTTGAAGAAATTAATCATGCTGGGGCAGGAGGACTTTGGGCAGAAATGGTTAGAAACAGAGGGTTTGAAGCCGGAGGTGCAAATGTTCCATCAAATATTTATCCATGGACAATTATTGGAGATGAATCATCCATTCTTGTGTCAACTGATCGCACTTCTTGCTTTGAAAGAAACAAGATTGCACTTCGTATGGAAGTTCTTTGCAATGCCAAGTCATGCCCTAACAATGGTGTTGGAATCTCTAACTCTGGATTCTGGGGCATGAACATTGAGGAAGGGAAGAAGTACAGAGTTATCTTCTATGCTAGGGCACTTGGAGTTGGACCACTTGATCTAAAGGTCTCGTTAGTGGGAGATGATGGTGTCAGTGTTGCTTCAACTCAAGTCGGAGGGTATGGAAGTTATGCTTATAAGTGGAGGAGAATGGAGACAACATTGGAAGCCAATGCTACAAATCATAATTCAAGCCTTCAAATTACCACAAATCATAGAGGTGTTATATGGCTAGACCAAGTCTCAGCTATGCCCTTAGACACACACAAGGGTCATGGTTTTAGAAAGGACCTGTTTCAGATGGTTGCAAATTTAAAGCCAAAATTTTTCAGATTTCCGGGTGGTTGCTATGTGGAAGGAGGTTATCTAAGAAATGCATTCCGTTGGAAAGACAGTGTTGGAGCATGGGAGGAGAGAGCTGGTCACTTTAATGATGTTTGGCATTATTGGACTGATGATGGTTTTGGTTTCTTTGAGGGTCTCCAGTTTGCAGAGGACGTTGGTGCATTGCCAGTATGGGTATTTAACAATGGTATCGGCCTTCATGACGCCGTGGATACATCTGCGGTTCTACCATTTGTGCAAGAAGCCCTTGATGGCATTGAGTTTGCAAGAGGCTCTCCCGATTCAACTTGGGGTTCTGTTAGAGCTTCAATGGGGCATCCTCAACCATTTGATTTGAGATTTGTTGCCATTGGAAATGAAGAATGTGGCATGCCAAACTATCTAGCAGGAAATTACCTGAAGTTCTATGCAGCGATAAAGCGTTCTTATCCAGATATTCAGATTATCACAAACTGTGATGGTTCTGGGCAGAACTTAGACATGCCTGCAGATTTCTATGATTTTCATATTTACACAAACGCTGAAGATATGTTTTATAAGAATACCAAGTTTGATGCTGCACCACGATCTGGACCAAAGGCATTTGTAAGTGAATACGCTGTTTGGAAGGATGATGCCCGCGATGGAACACTTTTATCTGCAGTGGCTGAAGCTGCATTCCTTATTGGATTGGAGAGGAACAGTGATCTTGTGCACATGGTTAGCTATGCACCACTTTTTGTCAATAACAACGACAGGATGTGGAGCCCAGATGCAATTGTGTTTAACTCGCATCAACTTTATGGAACTCCAAGCTATTGGAATCAACAACTATTTTCCGAATCTAGTGGAGCAACTTGGCTCAATTCAACGCTTCAAACTTCTTCCACTAAACTCGTAGCATCTGCAATTGAGTTTAATAATACTGAAGATAATAAGACATATATTAGAATAAAGGCTGTGAACTTTGGAGATGACCCCGAGAATCTGAAGATTTCAATAAATGGGTTGACTTCAAATGTTCAACAATCTGGATCGAAAATGATGGTGCTCACAGCACCTAATGTAATGGAAGAGAATTCTTTCTCTGAGCCAAAGAAGATTGTACCACAACACACCTTGCTGTTGAATGCAAATAAGGACATGGATGTCACACTTCCTCCTTATTCAGTTACATCTCTTGATCTGCTAAGATAG 1959 0.4089 MTSLFKITYIFFLLSLLALCFLSNANARVNHTSTLVVDGSKGSGRQIPDTFFGAFFEEINHAGAGGLWAEMVRNRGFEAGGANVPSNIYPWTIIGDESSILVSTDRTSCFERNKIALRMEVLCNAKSCPNNGVGISNSGFWGMNIEEGKKYRVIFYARALGVGPLDLKVSLVGDDGVSVASTQVGGYGSYAYKWRRMETTLEANATNHNSSLQITTNHRGVIWLDQVSAMPLDTHKGHGFRKDLFQMVANLKPKFFRFPGGCYVEGGYLRNAFRWKDSVGAWEERAGHFNDVWHYWTDDGFGFFEGLQFAEDVGALPVWVFNNGIGLHDAVDTSAVLPFVQEALDGIEFARGSPDSTWGSVRASMGHPQPFDLRFVAIGNEECGMPNYLAGNYLKFYAAIKRSYPDIQIITNCDGSGQNLDMPADFYDFHIYTNAEDMFYKNTKFDAAPRSGPKAFVSEYAVWKDDARDGTLLSAVAEAAFLIGLERNSDLVHMVSYAPLFVNNNDRMWSPDAIVFNSHQLYGTPSYWNQQLFSESSGATWLNSTLQTSSTKLVASAIEFNNTEDNKTYIRIKAVNFGDDPENLKISINGLTSNVQQSGSKMMVLTAPNVMEENSFSEPKKIVPQHTLLLNANKDMDVTLPPYSVTSLDLLR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02235 652 Pfam Alpha-L-arabinofuranosidase C-terminal domain 459 644 IPR010720 GO:0046373|GO:0046556
Aip06g02235 652 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 16 651 - -
Aip06g02235 652 Gene3D - 532 650 IPR013780 -
Aip06g02235 652 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 16 651 - -
Aip06g02235 652 Gene3D Glycosidases 215 531 - -
Aip06g02235 652 SMART alpha_l_af_c 458 644 IPR010720 GO:0046373|GO:0046556
Aip06g02235 652 SUPERFAMILY (Trans)glycosidases 209 541 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02235 Aip-Chr6 101275033 101278977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02235 1 652 Glycoside Hydrolase AT3G10740 61.515 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02235 K01209 - gmx:100802745 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02235 06 101275033 101278977 Aip06g02235 06 101275033 101278977 ECH