Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02207 ATGGAAACTCGCCGCTGCTATCGCAGCATCATCGTCGCCATTGTTGAGGAAACCCGAAGAGGAGATACAAGACAGAACCAAGGAAAAGAGAGTTGTCGCCACCGTTGCACCTTGTTGCTATCGGCTCTGTCGCataagCCAACAATAACTGTTAGACGTTCTGCTGATGATGAACCTGGTCCTTCCATTAGACCTCCTATTGATAGGGGAGATGTACAAGTTGATAATGATGGTGATAATTTGCATGATGAACTTACACCTCAACCTGAGGTTCCAGATGCTGAAGTTctacctgaaccaccaattgagtctgaattgagaagatctactagagagcgtcatccttctcagaaatactctcctcataaTGTTCTCTGCCTCTACATTATTATCATAGTGGCTAATTCTCTTGCTTTTCAATGTTCTGCTGCTGCTGCTTCTTCTTCTAATAATAATGATCAGATTTCAACTTTAGTTGTGAATGCTTCTATTGCATCTAGAAGGAGAATGCCAGATACTTTATTTGGAATATTTTTTGAGGAGATCAATCATGCTGGAGCTGGAGGATTGTGGGCTGAGCTTGTGAGTAATAGAGGTTTTGAAGCTGGGGGCACCCAAGTTCCATCAAATATTAAACCTTGGACTATAGTTGGAGAAGAATCATCTATTTTAGTGCAAACAGAACTCAATTCTTGCTTTGAACGCAATAAGGTTGCATTGAGAATGGATGTGTTATGTGATGATATTAATTGCCCTTCCGGCGGTGTTGGTATCTCTAATCCCGGTTACTGGGGCATGgatttaaaaatatatttaaattttttatcttttcaaaatctagacatattgatctttcatgttcatttgagtctgtcaaacccaacaaaaaaaatcaaacAAGTCTCAAACTGGAAAAGGATAGGGACTACATTGGAGGCGAATGGATCAAGTGCTAATTCAACCATTCAATTAACAACCACCAAGAAAGGCGTCATATGGTTGGACCAAGTTTCTGCCATGCCCCTTGACACGTTTAATGGACATGGTTTTCGAAAAGACTTGGTCAACATGCTGATAGAGTTGAAACCAGCTTTTATTAGATTTCCAGGTGGTTGCTTCGTAGAAGGACAAAGACTAAGTAATGCATTTAGGTGGAAAGAGAGTGTTGGGCCATGGGAGCAGAGACCAGGCCACTTTGGCGATGTTTGGAATTATTGGACTGATGATGCTTTTGGTTATTTTGAGGCTCTTCAACTAGCAGAGGACATTGGTGCAAAACCAATATGGGTCTTTAACAATGGTATTAGCCATACTGATGAAGTTGATACAAGCGCTATCAAGCCTTTTGTGCAAGATACCGTAGATGGTATTGAGTTTGCGAGAGGAGCAGCCACTTCGCAATGGGGTTCCGTTAGAGTTGCTATGGGGCACCCTAAGCCTTTTGACCTAAAATATGTCGCTATTGGAAATGAAAATTGTGGAAAGCAACACTACCAAGGCATGCATTATTTCTTTCTCCCTAATTTTTCGTGGAATTACCTTGCGTTCTACAATGCAATAAAACATGCTTATCCAGATATTAAGATTGTTTCAAATTGTGATGCTTCCTCCAAGCCGTTAGATCACCCCGCTGATTTGTACGAGTATCATACTTATCCTCATGACGCTCGAAGTATGTTTAATAACGCTCAGGTGTTTGATAAGACACCACGTAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGAGGAACAAGCCAAGCTTGGGACCCTTTTAGGAGCTGTATCTGAAGCTGGATTTCTTATTGGATTAGAAAGAAACAGTGATCACGTGGCGATGGCTTCGTATGCTCCTCTTTTTGTAAATGCAAATGACAGGAAGTGGAACCCAGATGCAATTGTTTTTAATGCGAATAAGGTTTATGGAACACCAAGCTATTGGGTGCAGTACATGTTTAGAGAGTCAAGTAACGGTGCAACATTTCTTGAATCACAGCTTCAAACAACAGATCCTACTTCACTTGCTGCATCTGCAATTCTCTGCCAAAATCCTCAAAATAACAAAACTTCCCTAAAGATAAAGGTTGCAAACATGAGAAGTGACCAAGTGAATCTCAAGATTTCTGTTGAGGGATATGCTACATCAAATCTTACTGAGTCAACAATTACTGTACTATCATCTATCAATGCATTGGATGAGAATACTTTCTCAGACCCAAAAAAGGTAGTACCAAAACGAAGTCCATTTCAGAGAGCTGGTAAGGAGATGAATTTCATAATCCCTCCAATTTCATTGACC 2307 0.3797 METRRCYRSIIVAIVEETRRGDTRQNQGKESCRHRCTLLLSALSHKPTITVRRSADDEPGPSIRPPIDRGDVQVDNDGDNLHDELTPQPEVPDAEVLPEPPIESELRRSTRERHPSQKYSPHNVLCLYIIIIVANSLAFQCSAAAASSSNNNDQISTLVVNASIASRRRMPDTLFGIFFEEINHAGAGGLWAELVSNRGFEAGGTQVPSNIKPWTIVGEESSILVQTELNSCFERNKVALRMDVLCDDINCPSGGVGISNPGYWGMDLKIYLNFLSFQNLDILIFHVHLSLSNPTKKIKQVSNWKRIGTTLEANGSSANSTIQLTTTKKGVIWLDQVSAMPLDTFNGHGFRKDLVNMLIELKPAFIRFPGGCFVEGQRLSNAFRWKESVGPWEQRPGHFGDVWNYWTDDAFGYFEALQLAEDIGAKPIWVFNNGISHTDEVDTSAIKPFVQDTVDGIEFARGAATSQWGSVRVAMGHPKPFDLKYVAIGNENCGKQHYQGMHYFFLPNFSWNYLAFYNAIKHAYPDIKIVSNCDASSKPLDHPADLYEYHTYPHDARSMFNNAQVFDKTPRNGPKAFVSEYALIGEEQAKLGTLLGAVSEAGFLIGLERNSDHVAMASYAPLFVNANDRKWNPDAIVFNANKVYGTPSYWVQYMFRESSNGATFLESQLQTTDPTSLAASAILCQNPQNNKTSLKIKVANMRSDQVNLKISVEGYATSNLTESTITVLSSINALDENTFSDPKKVVPKRSPFQRAGKEMNFIIPPISLT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02207 769 MobiDBLite consensus disorder prediction 52 89 - -
Aip06g02207 769 MobiDBLite consensus disorder prediction 52 116 - -
Aip06g02207 769 SMART alpha_l_af_c 579 767 IPR010720 GO:0046373|GO:0046556
Aip06g02207 769 Pfam Alpha-L-arabinofuranosidase C-terminal domain 580 767 IPR010720 GO:0046373|GO:0046556
Aip06g02207 769 MobiDBLite consensus disorder prediction 100 116 - -
Aip06g02207 769 Gene3D - 657 769 IPR013780 -
Aip06g02207 769 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 125 769 - -
Aip06g02207 769 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 125 769 - -
Aip06g02207 769 Gene3D Glycosidases 326 656 - -
Aip06g02207 769 SUPERFAMILY (Trans)glycosidases 320 661 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02207 Aip-Chr6 100102582 100130925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02207 157 769 Glycoside Hydrolase AT3G10740 59.048 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02207 K01209 - gmx:100780771 915.22